RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 UCMAQ8WVF2 138 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 ZNF778Q96MU6 729 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 FAM161BQ96MY7 647 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 CSPG4P5Q96PW8 444 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 TRAPPC9Q96Q05 1148 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 SLC13A1Q9BZW2 595 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 DNAJC28Q9NX36 388 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 NME7Q9Y5B8 376 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 GJA3Q9Y6H8 435 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 SCN1AP35498 2009 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 A0A087WZ62 844 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 MAGEA13PA6NCF6 341 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 DCAF8L1A6NGE4 600 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 SPDYE5A6NIY4 337 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PRR5-ARHGAP8B1AHC4 643 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 TSPAN1O60635 241 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PLIN3O60664 434 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 FKBP6O75344 327 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PRKCGP05129 697 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 CYP2C8P10632 490 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 CRABP2P29373 138 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 HOXD11P31277 338 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 MAGEA12P43365 314 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 AP2B1P63010 937 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 SARNPP82979 210 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 ARHGAP8P85298 464 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 GBE1Q04446 702 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 RCN2Q14257 317 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 FRG1Q14331 258 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 FASTKD1Q53R41 847 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 C6orf163Q5TEZ5 329 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 MROH9Q5TGP6 573 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 SCYL2Q6P3W7 929 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PACS1Q6VY07 963 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 WDR75Q8IWA0 830 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 FBXO16Q8IX29 292 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 LRRC52Q8N7C0 313 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 C12orf29Q8N999 325 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PIWIL2Q8TC59 973 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 ZNF668Q96K58 619 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 SPATA13Q96N96 652 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 KCTD15Q96SI1 283 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 FDXACB1Q9BRP7 624 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 NAT9Q9BTE0 207 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 RNPEPQ9H4A4 650 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PLEKHA5Q9HAU0 1116 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 GPRC5DQ9NZD1 345 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 DTLQ9NZJ0 730 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 SOX13Q9UN79 622 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 AP4E1Q9UPM8 1137 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 POLR2AP24928 1970 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 A0A088AWK7 358 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PIK3R2O00459 728 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 CCNT2O60583 730 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 ZNF189O75820 626 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 KLHL2O95198 593 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 SERPINE1P05121 402 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PIM1P11309 404 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 VAV1P15498 845 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 PGAM1P18669 254 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 TFE3P19532 575 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 GRK2P25098 689 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 CPA2P48052 419 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 RGS7P49802 495 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 HNRNPDQ14103 355 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 PDE1CQ14123 709 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 PCLAFQ15004 111 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 HEATR6Q6AI08 1181 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 KCNT2Q6UVM3 1135 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 STRADAQ7RTN6 431 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 ARNTL2Q8WYA1 636 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 ZBTB10Q96DT7 871 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 CPB2Q96IY4 423 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 EBF4Q9BQW3 602 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 TRIM56Q9BRZ2 755 aaKnown RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 R3HDMLQ9H3Y0 253 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 ZNF395Q9H8N7 513 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 SLC24A3Q9HC58 644 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 ZDHHC7Q9NXF8 308 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 DCDC2Q9UHG0 476 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 SCOCQ9UIL1 159 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 MAD1L1Q9Y6D9 718 aa6.87□□□□□ -1.31
CDH12-203ENST00000517378 FNDC1Q4ZHG4 1894 aaPredicted RBP6.87□□□□□ -1.31
CDH12-203ENST00000517378 A6NJR5 290 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 ZNF195O14628 629 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 TPP1O14773 563 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 BUD23O43709 281 aaKnown RBP6.86□□□□□ -1.31
CDH12-203ENST00000517378 OPHN1O60890 802 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 PROCP04070 461 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 PGK2P07205 417 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 INSRRP14616 1297 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 PRDX6P30041 224 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 GRIA1P42261 906 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 GLUD2P49448 558 aa6.86□□□□□ -1.31
CDH12-203ENST00000517378 HARS2P49590 506 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms