RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 TPX2Q9ULW0 747 aaKnown RBP12.38□□□□□ -0.43
LMNA-224ENST00000515711 ATP8A1Q9Y2Q0 1164 aa12.38□□□□□ -0.43
LMNA-224ENST00000515711 SYNJ2BP-COX16A0A087WUM0 186 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 FAM92AA1XBS5 289 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 EEF2KO00418 725 aaKnown RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 IFNB1P01574 187 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 SOD2P04179 222 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 NUDT17P0C025 328 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 SLC2A3P11169 496 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 GGCXP38435 758 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 VPS41P49754 854 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 RABGGTBP53611 331 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 TPI1P60174 286 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 WDR5P61964 334 aaKnown RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 FAM193AP78312 1265 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 PITX1P78337 314 aaPredicted RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 CREMQ03060 361 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 GPS1Q13098 491 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.43
LMNA-224ENST00000515711 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 TRIP13Q15645 432 aaPredicted RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 NCBP2-AS2Q69YL0 99 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 C1orf228Q6PIY5 440 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 GPR65Q8IYL9 337 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 ATXN2LQ8WWM7 1075 aaKnown RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 QKIQ96PU8 341 aaKnown RBP eCLIP12.37□□□□□ -0.43
LMNA-224ENST00000515711 IL23AQ9NPF7 189 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 CLIC5Q9NZA1 410 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 CWC15Q9P013 229 aaKnown RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 PAK5Q9P286 719 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 THEGQ9P2T0 379 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 PLAAQ9Y263 795 aa12.37□□□□□ -0.43
LMNA-224ENST00000515711 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
LMNA-224ENST00000515711 DNAH12Q6ZR08 3092 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 NT5C1B-RDH14C9J2C7 533 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 H3BQF6 201 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 AGPSO00116 658 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 CSF2RAP15509 400 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 GOT1P17174 413 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 YWHAQP27348 245 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 SERPINB6P35237 376 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 GLUD2P49448 558 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 IFRD2Q12894 506 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 SEMA3BQ13214 749 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 DPYSQ14117 519 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 BTG3Q14201 252 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 PAFAH1B3Q15102 231 aaKnown RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 UAP1Q16222 522 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 SLC45A4Q5BKX6 768 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 RNASEH2BQ5TBB1 312 aaKnown RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 TPGS2Q68CL5 300 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 PPP1R21Q6ZMI0 780 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 PPIL6Q8IXY8 311 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 SLC39A11Q8N1S5 342 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 BCL7CQ8WUZ0 217 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 RIN2Q8WYP3 895 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 EDEM1Q92611 657 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 RNF34Q969K3 372 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 FBXO32Q969P5 355 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 VWCEQ96DN2 955 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 PGLYRP2Q96PD5 576 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 HAPLN3Q96S86 360 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 CDK5RAP1Q96SZ6 601 aaKnown RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 BRD8Q9H0E9 1235 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 OSBPL2Q9H1P3 480 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 TLR8Q9NR97 1041 aaKnown RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 ARHGEF38Q9NXL2 777 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 SAE1Q9UBE0 346 aaPredicted RBP12.36□□□□□ -0.43
LMNA-224ENST00000515711 HEY1Q9Y5J3 304 aa12.36□□□□□ -0.43
LMNA-224ENST00000515711 TP73O15350 636 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 EIF3HO15372 352 aaKnown RBP eCLIP12.35□□□□□ -0.43
LMNA-224ENST00000515711 NCAM2O15394 837 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 RNF40O75150 1001 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 STK10O94804 968 aaKnown RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms