RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 FAM189BP81408 668 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 HPCAP84074 193 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 MCL1Q07820 350 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 DSC3Q14574 896 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 SFT2D3Q587I9 215 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF677Q86XU0 584 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 IQCF2Q8IXL9 164 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 KLHDC8BQ8IXV7 354 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 GPR65Q8IYL9 337 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 FAM186BQ8IYM0 893 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 TDHQ8IZJ6 230 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 KIAA1958Q8N8K9 716 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 B4GALNT2Q8NHY0 566 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF564Q8TBZ8 553 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-205ENST00000514271 LZICQ8WZA0 190 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF516Q92618 1163 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 ADPGKQ9BRR6 497 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 XPNPEP1Q9NQW7 623 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 EMCNQ9ULC0 261 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 TELO2Q9Y4R8 837 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 CEPT1Q9Y6K0 416 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 ACKR2O00590 384 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 CLDN3O15551 220 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 RFPL1O75677 317 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 MAGEA4P43358 317 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 WNT7BP56706 349 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 SURF1Q15526 300 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 SYCP2LQ5T4T6 812 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 CMTR2Q8IYT2 770 aaKnown RBP7.67□□□□□ -1.18
CLIP1-205ENST00000514271 ARHGAP18Q8N392 663 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 NLRP7Q8WX94 980 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 SERAC1Q96JX3 654 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 BTBD6Q96KE9 485 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
CLIP1-205ENST00000514271 PITPNM3Q9BZ71 974 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 FZD8Q9H461 694 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 KCNK4Q9NYG8 393 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 MTRF1LQ9UGC7 380 aaKnown RBP7.67□□□□□ -1.18
CLIP1-205ENST00000514271 TTLL3Q9Y4R7 772 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 PTPRDP23468 1912 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 EVPLQ92817 2033 aa7.67□□□□□ -1.18
CLIP1-205ENST00000514271 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SMIM31A0A1B0GVY4 71 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SOBPA7XYQ1 873 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 C1RP00736 705 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MYBL1P10243 752 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CDKN2BP42772 138 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SLCO1A2P46721 670 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 BPIFB4P59827 614 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 LPIN1Q14693 890 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 HERC4Q5GLZ8 1057 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 FNBP1LQ5T0N5 605 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 C10orf62Q5T681 223 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CDHR3Q6ZTQ4 885 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MARK2Q7KZI7 788 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MRPL10Q7Z7H8 261 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MTDHQ86UE4 582 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 IGDCC3Q8IVU1 814 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 UBL4BQ8N7F7 174 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 UHMK1Q8TAS1 419 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 FAM167BQ9BTA0 163 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TUBB6Q9BUF5 446 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 NUP85Q9BW27 656 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 LMAN2LQ9H0V9 348 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 KMT5AQ9NQR1 393 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TBCCD1Q9NVR7 557 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM161AQ9NX61 479 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 STOML1Q9UBI4 398 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SETSIPP0DME0 302 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 DLATP10515 647 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 C7P10643 843 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 GLRA2P23416 452 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 NMT1P30419 496 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MAGEA10P43363 369 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 IFNAR2P48551 515 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TRPC1P48995 793 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 NLRP11P59045 1033 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 MAMLD1Q13495 774 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TOMM20Q15388 145 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF394Q53GI3 561 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM240Q5SV17 173 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SLC24A5Q71RS6 500 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TRIM74Q86UV6 250 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TRIM73Q86UV7 250 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 LCA5Q86VQ0 697 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 TMEM151AQ8N4L1 468 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 ACTRT2Q8TDY3 377 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SLC44A1Q8WWI5 657 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 PRPF31Q8WWY3 499 aaKnown RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CTNNBL1Q8WYA6 563 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CPT1BQ92523 772 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 BADQ92934 168 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SMC6Q96SB8 1091 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SORT1Q99523 831 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CCDC113Q9H0I3 377 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 EBF3Q9H4W6 596 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 CASS4Q9NQ75 786 aa7.66□□□□□ -1.18
CLIP1-205ENST00000514271 SLC17A7Q9P2U7 560 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms