RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ZNF778	Q96MU6	729 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	TRPV5	Q9NQA5	729 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	KMT5A	Q9NQR1	393 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	NCKIPSD	Q9NZQ3	722 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	POU2F3	Q9UKI9	436 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	CNTNAP4	Q9C0A0	1308 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582	NHSL1	Q5SYE7	1610 aa		11.46	□□□□□ -0.57
PDCD6-210	ENST00000513582		A0A0B4J269	797 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	CFAP99	D6REC4	459 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	PLOD2	O00469	737 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	TLR3	O15455	904 aa	Known RBP	11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	PRDX6	P30041	224 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	GSS	P48637	474 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	NME3	Q13232	169 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	ORC1	Q13415	861 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	TUBB3	Q13509	450 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	PERM1	Q5SV97	790 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	SPOPL	Q6IQ16	392 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	KATNAL2	Q8IYT4	538 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZNF786	Q8N393	782 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	EXD1	Q8NHP7	514 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	ITPKC	Q96DU7	683 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	NT5C1B	Q96P26	610 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	NAA50	Q9GZZ1	169 aa	Known RBP	11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	NRDE2	Q9H7Z3	1164 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	COQ10B	Q9H8M1	238 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	DMAC2	Q9NW81	257 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	DAPK2	Q9UIK4	370 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	PCDHB4	Q9Y5E5	795 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLIT2	O94813	1529 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	CROCC	Q5TZA2	2017 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	LAMB1	P07942	1786 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	IQCA1L	A6NCM1	817 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	MEIS2	O14770	477 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	AQP9	O43315	295 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	PSTPIP1	O43586	416 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	GRIN3B	O60391	1043 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	IL1B	P01584	269 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	COX4I1	P13073	169 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	IREB2	P48200	963 aa	Known RBP	11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	PRELP	P51888	382 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	TRAF2	Q12933	501 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZBTB17	Q13105	803 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	VPS72	Q15906	364 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	DCLRE1A	Q6PJP8	1040 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	TMEM270	Q6UE05	265 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582		Q8N9G6	341 aa	Predicted RBP	11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	GLT8D2	Q9H1C3	349 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	C1orf112	Q9NSG2	853 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	SIRPG	Q9P1W8	387 aa		11.46	□□□□□ -0.58
PDCD6-210	ENST00000513582	CXorf49	A8MYA2	514 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582		H3BNH8	94 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	STX16-NPEPL1	H3BU86	382 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	NFIB	O00712	420 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	PEX10	O60683	326 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	BAIAP3	O94812	1187 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	MCF2	P10911	925 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	PSMC5	P62195	406 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	AARS2	Q5JTZ9	985 aa	Known RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	TXNRD3NB	Q6F5E7	133 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	POTEA	Q6S8J7	498 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	TMEM26	Q6ZUK4	368 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	FAM47B	Q8NA70	645 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	XXYLT1	Q8NBI6	393 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	CHPT1	Q8WUD6	406 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	RSAD2	Q8WXG1	361 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	SHC3	Q92529	594 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	ANKRD36BP1	Q96IX9	119 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	SLITRK1	Q96PX8	696 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	HERC2P3	Q9BVR0	1158 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	PCDH9	Q9HC56	1237 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	THAP1	Q9NVV9	213 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	PADI4	Q9UM07	663 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	MRPL11	Q9Y3B7	192 aa	Known RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	FAM47E-STBD1	D6RA91	191 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	hCG_1984214	I3L0E3	225 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	KRT37	O76014	449 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	CFH	P08603	1231 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	ENO3	P13929	434 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	MZF1	P28698	734 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	HSPA13	P48723	471 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	MS4A2	Q01362	244 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	DMP1	Q13316	513 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	FASTKD1	Q53R41	847 aa	Known RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	CHERP	Q8IWX8	916 aa	Known RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	DDX1	Q92499	740 aa	Known RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	NLRP4	Q96MN2	994 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	CENPO	Q9BU64	300 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	IMPG2	Q9BZV3	1241 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	TRPC5	Q9UL62	973 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	SNCAIP	Q9Y6H5	919 aa		11.45	□□□□□ -0.58
PDCD6-210	ENST00000513582	E2F8	A0AVK6	867 aa		11.44	□□□□□ -0.58
PDCD6-210	ENST00000513582	SOBP	A7XYQ1	873 aa		11.44	□□□□□ -0.58
PDCD6-210	ENST00000513582	RNASEH2A	O75792	299 aa	Known RBP	11.44	□□□□□ -0.58
PDCD6-210	ENST00000513582	BPGM	P07738	259 aa		11.44	□□□□□ -0.58
PDCD6-210	ENST00000513582	NPR1	P16066	1061 aa		11.44	□□□□□ -0.58
PDCD6-210	ENST00000513582	ZNF182	P17025	639 aa	Predicted RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms