RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CBSLP0DN79 551 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 PEPDP12955 493 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 HOXB2P14652 356 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 NDUFS1P28331 727 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 HOXA11P31270 313 aaPredicted RBP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 CBSP35520 551 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 IGHMBP2P38935 993 aaKnown RBP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 GPS1Q13098 491 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 SEMA3BQ13214 749 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 SEMA3AQ14563 771 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 PRTGQ2VWP7 1150 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 ARHGAP15Q53QZ3 475 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 ASPHD1Q5U4P2 390 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 C16orf89Q6UX73 402 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 RHPN2Q8IUC4 686 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 CCDC28AQ8IWP9 274 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 KRT78Q8N1N4 520 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 MPLKIPQ8TAP9 179 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 ABHD5Q8WTS1 349 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 IQCDQ96DY2 449 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 NLRP4Q96MN2 994 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 GDF15Q99988 308 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 ZPBPQ9BS86 351 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 PIMREGQ9BSJ6 248 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 BTBD1Q9H0C5 482 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 AAMDCQ9H7C9 122 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 ZBTB26Q9HCK0 441 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 DDX21Q9NR30 783 aaKnown RBP eCLIP2.67□□□□□ -1.98
PDGFC-208ENST00000512711 THSD1Q9NS62 852 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 UTS2RQ9UKP6 389 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 B3GNT3Q9Y2A9 372 aa2.67□□□□□ -1.98
PDGFC-208ENST00000512711 GOLGA6CA6NDK9 693 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 GOLGA6BA6NDN3 693 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 FAM90A8PA6NJQ4 464 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PRR23D1E9PI22 279 aaPredicted RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 THAP12O43422 761 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 SLC28A2O43868 658 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 WNT1P04628 370 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 ENO1P06733 434 aaKnown RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 RFPL3SP0C7P2 107 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 FAM90A13PP0C7W8 464 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 FAM90A24PP0C7X0 464 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 GOLGA6DP0CG33 693 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PRR23D2P0DMB1 279 aaPredicted RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 CHRNB1P11230 501 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 SLC5A1P13866 664 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PECAM1P16284 738 aaPredicted RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TSHRP16473 764 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 RPL17P18621 184 aaKnown RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 FGFR2P21802 821 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 MST1P26927 711 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 GABRB3P28472 473 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TNFRSF8P28908 595 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 ARRB2P32121 409 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PRIM2P49643 509 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 DGKQP52824 942 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PPATQ06203 517 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 SMTNL2Q2TAL5 461 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF585BQ52M93 769 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PIK3CD-AS1Q5SR53 167 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 FAXCQ5TGI0 409 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 DAB2IPQ5VWQ8 1189 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 CCDC144NLQ6NUI1 221 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 ACSM6Q6P461 480 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 RFX8Q6ZV50 586 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 B4GALNT4Q76KP1 1039 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 WDR75Q8IWA0 830 aaKnown RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TMEM199Q8N511 208 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 GLIS1Q8NBF1 620 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 SLC44A5Q8NCS7 719 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 MCRS1Q96EZ8 462 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF845Q96IR2 970 aaPredicted RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 GPR78Q96P69 363 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TBCBQ99426 244 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TUBB6Q9BUF5 446 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TTLL2Q9BWV7 592 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 PCDHAC1Q9H158 963 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 FSCN3Q9NQT6 498 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 GOLGA6AQ9NYA3 693 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 TMOD4Q9NZQ9 345 aa2.66□□□□□ -1.98
PDGFC-208ENST00000512711 AGO2Q9UKV8 859 aaKnown RBP2.66□□□□□ -1.98
PDGFC-208ENST00000512711 KIR2DS5A0A0G2JLQ3 304 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 CLCA1A8K7I4 914 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 KIR2DS3K7RE56 304 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 DHHO43323 396 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 CCNT2O60583 730 aaKnown RBP2.65□□□□□ -1.99
PDGFC-208ENST00000512711 CASP5P51878 434 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 SLC12A2P55011 1212 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 P2RX3P56373 397 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 DMWDQ09019 674 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 PTGR1Q14914 329 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 INPP5JQ15735 1006 aaPredicted RBP2.65□□□□□ -1.99
PDGFC-208ENST00000512711 DHRS13Q6UX07 377 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 DLK2Q6UY11 383 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 GPSM1Q86YR5 675 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 UEVLDQ8IX04 471 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 LAS2Q8IYD9 372 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 CLASRPQ8N2M8 674 aaKnown RBP2.65□□□□□ -1.99
PDGFC-208ENST00000512711 CCDC33Q8N5R6 958 aa2.65□□□□□ -1.99
PDGFC-208ENST00000512711 OR52L2PQ8NGH6 319 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms