RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
CDK7-208ENST00000512687 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
CDK7-208ENST00000512687 DOCK4Q8N1I0 1966 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 TSPAN3O60637 253 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
CDK7-208ENST00000512687 NDUFV2P19404 249 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 FOXK2Q01167 660 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 AASDHQ4L235 1098 aaPredicted RBP12.54□□□□□ -0.4
CDK7-208ENST00000512687 TMEM215Q68D42 235 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 CHPFQ8IZ52 775 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 PGBD3Q8N328 593 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 C12orf50Q8NA57 414 aaPredicted RBP12.54□□□□□ -0.4
CDK7-208ENST00000512687 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
CDK7-208ENST00000512687 HSFY1Q96LI6 401 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
CDK7-208ENST00000512687 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 PLXNA2O75051 1894 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 PATE3B3GLJ2 98 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 THAP12O43422 761 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 FBXO21O94952 628 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 CAVIN2O95810 425 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 PNMA6AP0CW24 399 aaPredicted RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 SDHBP21912 280 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 PON1P27169 355 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 GNA15P30679 374 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 SLC6A4P31645 630 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 IL12RB1P42701 662 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 MTIF2P46199 727 aaKnown RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 DHPSP49366 369 aaPredicted RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 HARS2P49590 506 aaKnown RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 MIIPQ5JXC2 388 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 DPY19L2P1Q6NXN4 242 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 GBP6Q6ZN66 633 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 CLEC17AQ6ZS10 378 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 ANKS1BQ7Z6G8 1248 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 SCUBE3Q8IX30 993 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 TMEFF1Q8IYR6 380 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 WFDC5Q8TCV5 224 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 ZNF606Q8WXB4 792 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 SHC3Q92529 594 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 MYEOVQ96EZ4 313 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 THAP9Q9H5L6 903 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 VPS45Q9NRW7 570 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 LMBRD1Q9NUN5 540 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 THAP10Q9P2Z0 257 aaPredicted RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 APEX2Q9UBZ4 518 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 STON1Q9Y6Q2 735 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
CDK7-208ENST00000512687 CACNA1EQ15878 2313 aa12.53□□□□□ -0.4
CDK7-208ENST00000512687 IGHV1OR15-9A0A0B4J2B8 117 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 GTPBP10A4D1E9 387 aaKnown RBP12.52□□□□□ -0.41
CDK7-208ENST00000512687 E5RJQ4 531 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
CDK7-208ENST00000512687 LATS1O95835 1130 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 CYBBP04839 570 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 NCAM1P13591 858 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 PTGER3P43115 390 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 LIMK1P53667 647 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.41
CDK7-208ENST00000512687 ENPP2Q13822 863 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 MEA1Q16626 185 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 MAN2A1Q16706 1144 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 EXOC3L4Q17RC7 722 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 ENOSF1Q7L5Y1 443 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 TAC4Q86UU9 113 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 C11orf74Q86VG3 221 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 DQX1Q8TE96 717 aaKnown RBP12.52□□□□□ -0.41
CDK7-208ENST00000512687 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
CDK7-208ENST00000512687 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
CDK7-208ENST00000512687 ST7Q9NRC1 585 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 NAALADL1Q9UQQ1 740 aa12.52□□□□□ -0.41
CDK7-208ENST00000512687 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 TM4SF5O14894 197 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
CDK7-208ENST00000512687 PRKCHP24723 683 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 HLA-FP30511 346 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 ANP32AP39687 249 aaKnown RBP12.51□□□□□ -0.41
CDK7-208ENST00000512687 USP8P40818 1118 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 TBX4P57082 545 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 ZNF234Q14588 700 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 TAF5Q15542 800 aa12.51□□□□□ -0.41
CDK7-208ENST00000512687 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms