RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 COQ4Q9Y3A0 265 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.31
VEGFA-216ENST00000512683 CACNA1EQ15878 2313 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 ATRXP46100 2492 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 SLC12A8A0AV02 714 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 MEI4A8MW99 385 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
VEGFA-216ENST00000512683 CER1O95813 267 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
VEGFA-216ENST00000512683 MXI1P50539 228 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 TKTL1P51854 596 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 SFSWAPQ12872 951 aaKnown RBP13.14□□□□□ -0.31
VEGFA-216ENST00000512683 GRIK2Q13002 908 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-216ENST00000512683 ZNF234Q14588 700 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 ADGRF1Q5T601 910 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 CHCHD4Q8N4Q1 142 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■□□□ 13.1
VEGFA-216ENST00000512683 OR2T3Q8NH03 318 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 RNF139Q8WU17 664 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 KCTD13Q8WZ19 329 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-216ENST00000512683 BHMTQ93088 406 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 AZIN2Q96A70 460 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 TMA16Q96EY4 203 aaKnown RBP13.14□□□□□ -0.31
VEGFA-216ENST00000512683 GSDMAQ96QA5 445 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 GPR174Q9BXC1 333 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 LRRC4Q9HBW1 653 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 ABCC13Q9NSE7 274 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 HESX1Q9UBX0 185 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
VEGFA-216ENST00000512683 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 LAMA1P25391 3075 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 IRAK2O43187 625 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 CBFA2T3O75081 653 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 CAPNS1P04632 268 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 ATP5BP06576 529 aaKnown RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 COPAP53621 1224 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 BCAT1P54687 386 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 FKBP3Q00688 224 aaKnown RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 ZNF658Q5TYW1 1059 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 DCAF12L1Q5VU92 463 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 SERPINA13PQ6UXR4 307 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 KIAA0907Q7Z7F0 614 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 UNC45BQ8IWX7 931 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 ZC3H3Q8IXZ2 948 aaKnown RBP13.13□□□□□ -0.31
VEGFA-216ENST00000512683 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 FSCN3Q9NQT6 498 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 CNGB3Q9NQW8 809 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 RMND1Q9NWS8 449 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 KLK13Q9UKR3 277 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 PCOLCE2Q9UKZ9 415 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 SCML1Q9UN30 329 aa13.13□□□□□ -0.31
VEGFA-216ENST00000512683 THADAQ6YHU6 1953 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 GOLGA6L4A6NEF3 574 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 PMM2O15305 246 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 DFNA5O60443 496 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 EPHX1P07099 455 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 HMBSP08397 361 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 FTH1P19P0C7X4 201 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 SETSIPP0DME0 302 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 VDRP11473 427 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 TBXAS1P24557 533 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 MAOBP27338 520 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 MATKP42679 507 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 AFF3P51826 1226 aaKnown RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 PMS1P54277 932 aaKnown RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 FAM193AP78312 1265 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 BST2Q10589 180 aaKnown RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 CUL2Q13617 745 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 STILQ15468 1287 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 TEAD4Q15561 434 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 SGO2Q562F6 1265 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 BSPRYQ5W0U4 402 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 ANKRD40Q6AI12 368 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 PROSER1Q86XN7 944 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 KDM1BQ8NB78 822 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 C1orf216Q8TAB5 229 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 CIPCQ9C0C6 399 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 SLC6A17Q9H1V8 727 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 TMEM245Q9H330 911 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
VEGFA-216ENST00000512683 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
VEGFA-216ENST00000512683 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
VEGFA-216ENST00000512683 PKD1L2Q7Z442 2459 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 FLRT2O43155 660 aa13.11□□□□□ -0.31
VEGFA-216ENST00000512683 DLDP09622 509 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms