RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 TAC4Q86UU9 113 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 LRRTM3Q86VH5 581 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 PALM2Q8IXS6 379 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 PYROXD2Q8N2H3 581 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 FBXO36Q8NEA4 188 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 HTR3CQ8WXA8 447 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 ARHGEF2Q92974 986 aaKnown RBP8.12□□□□□ -1.11
SSBP2-213ENST00000509743 TOX2Q96NM4 488 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 CASD1Q96PB1 797 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 DEFB118Q96PH6 123 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 TMEM209Q96SK2 561 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 SELENOSQ9BQE4 189 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 FBXO44Q9H4M3 255 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 ACSS3Q9H6R3 686 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 WDCPQ9H6R7 721 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 LRRC4CQ9HCJ2 640 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 XAB2Q9HCS7 855 aaKnown RBP8.12□□□□□ -1.11
SSBP2-213ENST00000509743 ETNK2Q9NVF9 386 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 COMMD8Q9NX08 183 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 EURLQ9NYK6 297 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 COX16Q9P0S2 106 aa8.12□□□□□ -1.11
SSBP2-213ENST00000509743 PSMC3IPQ9P2W1 217 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-213ENST00000509743 ZMYND8Q9ULU4 1186 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-213ENST00000509743 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.12□□□□□ -1.11
SSBP2-213ENST00000509743 CLUHO75153 1309 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 F8W810 466 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 IRAK2O43187 625 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 PQBP1O60828 265 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 ALDH2P05091 517 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 SLC2A3P11169 496 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 MLNP12872 115 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 CCL5P13501 91 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 FGFR3P22607 806 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 CCR1P32246 355 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 STX2P32856 288 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 PSEN1P49768 467 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 GEMIN4P57678 1058 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 COG7P83436 770 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 GPNMBQ14956 572 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 FASTKD3Q14CZ7 662 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 FNBP1LQ5T0N5 605 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 MSANTD2Q6P1R3 559 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 MON1AQ86VX9 555 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 SCN4BQ8IWT1 228 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 CCDC13Q8IYE1 715 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 CNPY4Q8N129 248 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 LRRC43Q8N309 656 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 BCAS4Q8TDM0 211 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 C2orf15Q8WU43 125 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 EDEM1Q92611 657 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 RNF34Q969K3 372 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 SERPINB11Q96P15 392 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 HAPLN3Q96S86 360 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 CYTH2Q99418 400 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 RNF208Q9H0X6 261 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 HIPK3Q9H422 1215 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 EIF2B3Q9NR50 452 aaKnown RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 ARHGEF38Q9NXL2 777 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 ABI2Q9NYB9 513 aaPredicted RBP8.11□□□□□ -1.11
SSBP2-213ENST00000509743 DNAJB4Q9UDY4 337 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 SCML2Q9UQR0 700 aa8.11□□□□□ -1.11
SSBP2-213ENST00000509743 TCRBV7S3A2A0A539 114 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 CARNS1A5YM72 827 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 GMNCA6NCL1 334 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 RNF103O00237 685 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 NDUFAB1O14561 156 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 FGF10O15520 208 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 RTN3O95197 1032 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 MAP3K6O95382 1288 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 APRTP07741 180 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 OR4Q2P0C623 313 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 CHN1P15882 459 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ERCC2P18074 760 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 RFC2P35250 354 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ELK3P41970 407 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 SLC11A1P49279 550 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 RABGGTBP53611 331 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 SLC18A1P54219 525 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 GPX6P59796 221 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 RPL10AP62906 217 aaKnown RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 NRG1Q02297 640 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ZNF33AQ06730 810 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 PPIDQ08752 370 aaKnown RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 GPR17Q13304 367 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 MTA1Q13330 715 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 EIF4EBP2Q13542 120 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 PARP6Q2NL67 630 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 MSS51Q4VC12 460 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ANKRD20A2Q5SQ80 823 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ACBD5Q5T8D3 534 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ANKRD20A1Q5TYW2 823 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 C1orf53Q5VUE5 145 aa8.1□□□□□ -1.11
SSBP2-213ENST00000509743 ANKRD20A3Q5VUR7 823 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms