RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 TLR6Q9Y2C9 796 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 SPAG17Q6Q759 2223 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 TIMM44O43615 452 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 TSPAN3O60637 253 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 APOEP02649 317 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 CHRM1P11229 460 aaPredicted RBP19.41■□□□□ 0.7
UBE3D-207ENST00000509102 MPLP40238 635 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 YWHAZP63104 245 aaKnown RBP19.41■□□□□ 0.7
UBE3D-207ENST00000509102 CREB5Q02930 508 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 MIIPQ5JXC2 388 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 LPCAT2Q7L5N7 544 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 GPT2Q8TD30 523 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 NETO1Q8TDF5 533 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 DQX1Q8TE96 717 aaKnown RBP19.41■□□□□ 0.7
UBE3D-207ENST00000509102 IPO4Q8TEX9 1081 aaKnown RBP19.41■□□□□ 0.7
UBE3D-207ENST00000509102 AZIN2Q96A70 460 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 PPP1R13BQ96KQ4 1090 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 GABRG3Q99928 467 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 CIPCQ9C0C6 399 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 LHX5Q9H2C1 402 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 SIX2Q9NPC8 291 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 ACP6Q9NPH0 428 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 VPS45Q9NRW7 570 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.41■□□□□ 0.7
UBE3D-207ENST00000509102 DMXL1Q9Y485 3027 aa19.41■□□□□ 0.7
UBE3D-207ENST00000509102 PAPSS1O43252 624 aaPredicted RBP19.4■□□□□ 0.7
UBE3D-207ENST00000509102 ACSL4O60488 711 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 ZNF217O75362 1048 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 IGLV3-27P01718 113 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 ZNF806P0C7X5 589 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 P2RY2P41231 377 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 GEN1Q17RS7 908 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 EFHC1Q5JVL4 640 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 FKBP15Q5T1M5 1219 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 MPP7Q5T2T1 576 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 PMS2CLQ68D20 193 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 RBM43Q6ZSC3 357 aaKnown RBP19.4■□□□□ 0.7
UBE3D-207ENST00000509102 PASD1Q8IV76 773 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 OLIG1Q8TAK6 271 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 WFIKKN2Q8TEU8 576 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 ELOVL2Q9NXB9 296 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 CACNA2D2Q9NY47 1150 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 DLL3Q9NYJ7 618 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 SLC12A6Q9UHW9 1150 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 NAALADL1Q9UQQ1 740 aa19.4■□□□□ 0.7
UBE3D-207ENST00000509102 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 FOXN3O00409 490 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 SYNCRIPO60506 623 aaKnown RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 GLI1P08151 1106 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 HOXD9P28356 352 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 STX1AQ16623 288 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 KLHDC7AQ5VTJ3 777 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 SLC36A4Q6YBV0 504 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 CYP2U1Q7Z449 544 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 HJURPQ8NCD3 748 aaPredicted RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 PIWIL1Q96J94 861 aaKnown RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 ACOX2Q99424 681 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 RTKNQ9BST9 563 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 LSM14BQ9BX40 385 aaKnown RBP19.39■□□□□ 0.69
UBE3D-207ENST00000509102 TAB2Q9NYJ8 693 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 STON1Q9Y6Q2 735 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 EML5Q05BV3 1969 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 RALGAPA1Q6GYQ0 2036 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 CEP250Q9BV73 2442 aa19.39■□□□□ 0.69
UBE3D-207ENST00000509102 A0A1W2PQF6 199 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 HSF2BPO75031 334 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 CAVIN2O95810 425 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 FYNP06241 537 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 GABRG2P18507 467 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 DPP6P42658 865 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 DHPSP49366 369 aaPredicted RBP19.38■□□□□ 0.69
UBE3D-207ENST00000509102 CDK17Q00537 523 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 DRAP1Q14919 205 aaPredicted RBP19.38■□□□□ 0.69
UBE3D-207ENST00000509102 SPDYCQ5MJ68 293 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 CCDC183Q5T5S1 534 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 C11orf57Q6ZUT1 292 aaPredicted RBP19.38■□□□□ 0.69
UBE3D-207ENST00000509102 TAC4Q86UU9 113 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 SLC47A2Q86VL8 602 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 FAM71AQ8IYT1 594 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 AHI1Q8N157 1196 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 RLN3Q8WXF3 142 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 FAM204AQ9H8W3 233 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 ASNSD1Q9NWL6 643 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 CALCOCO1Q9P1Z2 691 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 THAP10Q9P2Z0 257 aaPredicted RBP19.38■□□□□ 0.69
UBE3D-207ENST00000509102 CYTH4Q9UIA0 394 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 HCN2Q9UL51 889 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 PLA2G4CQ9UP65 541 aa19.38■□□□□ 0.69
UBE3D-207ENST00000509102 MYO18AQ92614 2054 aaKnown RBP19.37■□□□□ 0.69
UBE3D-207ENST00000509102 BCLAF3A2AJT9 711 aaKnown RBP19.37■□□□□ 0.69
UBE3D-207ENST00000509102 AP5Z1O43299 807 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 TBL1XO60907 577 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 TRUB2O95900 331 aaKnown RBP19.37■□□□□ 0.69
UBE3D-207ENST00000509102 MOCS2O96007 188 aaPredicted RBP19.37■□□□□ 0.69
UBE3D-207ENST00000509102 SLC2A3P11169 496 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 UCHL3P15374 230 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 CLCN1P35523 988 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 MTA1Q13330 715 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 CCDC6Q16204 474 aa19.37■□□□□ 0.69
UBE3D-207ENST00000509102 DCAF6Q58WW2 860 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms