RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 USP29Q9HBJ7 922 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 SNX15Q9NRS6 342 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 ABHD10Q9NUJ1 306 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 LIN7CQ9NUP9 197 aaKnown RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 FBXO28Q9NVF7 368 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 NDUFAF4Q9P032 175 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 SEMA5BQ9P283 1151 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 PDP2Q9P2J9 529 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 TRPC5Q9UL62 973 aaPredicted RBP3.93□□□□□ -1.78
LSM6-205ENST00000507449 FZD4Q9ULV1 537 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 VPS4AQ9UN37 437 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 ENTPD2Q9Y5L3 495 aa3.93□□□□□ -1.78
LSM6-205ENST00000507449 A0A1B0GVC2 190 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 AGAP5A6NIR3 686 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 GCP02774 474 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 RXRAP19793 462 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 MMP8P22894 467 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 AARSP49588 968 aaKnown RBP eCLIP3.92□□□□□ -1.78
LSM6-205ENST00000507449 JAK3P52333 1124 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 COPB1P53618 953 aaKnown RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 CFHR3Q02985 330 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 COL10A1Q03692 680 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 CCDC15Q0P6D6 951 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 RPS6KA2Q15349 733 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 TBC1D25Q3MII6 688 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 ZNF362Q5T0B9 420 aaPredicted RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 TSTD2Q5T7W7 516 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 KIAA1324Q6UXG2 1013 aaKnown RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 KYAT3Q6YP21 454 aaKnown RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 TERB1Q8NA31 727 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 OR52L2PQ8NGH6 319 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 GPR150Q8NGU9 434 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 MAFAQ8NHW3 353 aaPredicted RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 SLC2A12Q8TD20 617 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 CLEC4CQ8WTT0 213 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 CPT1BQ92523 772 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 SLC9A6Q92581 669 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 GOLGA1Q92805 767 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 USP13Q92995 863 aaPredicted RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 NAF1Q96HR8 494 aaKnown RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 REXO5Q96IC2 774 aaKnown RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 TBATAQ96M53 351 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 COG8Q96MW5 612 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 TWNKQ96RR1 684 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 CIPCQ9C0C6 399 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 CHODLQ9H9P2 273 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 RIC8AQ9NPQ8 531 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 RASSF1Q9NS23 344 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 ING1Q9UK53 422 aaPredicted RBP3.92□□□□□ -1.78
LSM6-205ENST00000507449 PACSIN3Q9UKS6 424 aa3.92□□□□□ -1.78
LSM6-205ENST00000507449 TCRBV5S1A1TA0A578 114 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 TMEM191CA6NGB0 347 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 MBD3L5A6NJ08 208 aaPredicted RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 C16orf96A6NNT2 1141 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 STX16-NPEPL1H3BU86 382 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 GCOM1H8Y6P7 765 aaPredicted RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 STX16O14662 325 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 TFRCP02786 760 aaKnown RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 HNRNPCP07910 306 aaKnown RBP eCLIP3.91□□□□□ -1.78
LSM6-205ENST00000507449 CYP3A4P08684 503 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 ZNF37AP17032 561 aaPredicted RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 ACVRL1P37023 503 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 PAPOLAP51003 745 aaKnown RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 TAS2R50P59544 299 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 RBM6P78332 1123 aaKnown RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 KLF10Q13118 480 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 TAF12Q16514 161 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 AWAT1Q58HT5 328 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 ZNF484Q5JVG2 852 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 MMS22LQ6ZRQ5 1243 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 AMER2Q8N7J2 671 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 FAM71DQ8N9W8 422 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 CEP70Q8NHQ1 597 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 KTI12Q96EK9 354 aaPredicted RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 FAR2Q96K12 515 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 TIMP4Q99727 224 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 PRRX2Q99811 253 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 CINPQ9BW66 212 aaPredicted RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 PRDM13Q9H4Q3 707 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 SYNPO2LQ9H987 977 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 RMI1Q9H9A7 625 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 PLEKHA2Q9HB19 425 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 TMEM160Q9NX00 188 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 GAR1Q9NY12 217 aaKnown RBP3.91□□□□□ -1.78
LSM6-205ENST00000507449 SERGEFQ9UGK8 458 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 SLC12A4Q9UP95 1085 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 DNAJC16Q9Y2G8 782 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 CRYL1Q9Y2S2 319 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 PCDHA10Q9Y5I2 948 aa3.91□□□□□ -1.78
LSM6-205ENST00000507449 A0A087X1B8 175 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 H3BNC9 293 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 PRYO14603 147 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 FYB1O15117 783 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 ORC4O43929 436 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 EXOC3O60645 756 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 FZD7O75084 574 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 MT-CO3P00414 261 aa3.9□□□□□ -1.79
LSM6-205ENST00000507449 C1RP00736 705 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms