RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 SYT13Q7L8C5 426 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 NOP9Q86U38 636 aaKnown RBP10.24□□□□□ -0.77
NR1I3-220ENST00000505005 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 PASD1Q8IV76 773 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 CNGA4Q8IV77 575 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 TMEM105Q8N8V8 129 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 HJURPQ8NCD3 748 aaPredicted RBP10.24□□□□□ -0.77
NR1I3-220ENST00000505005 C3orf20Q8ND61 904 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 DQX1Q8TE96 717 aaKnown RBP10.24□□□□□ -0.77
NR1I3-220ENST00000505005 C1orf74Q96LT6 269 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 EIF3CQ99613 913 aaKnown RBP10.24□□□□□ -0.77
NR1I3-220ENST00000505005 FOXQ1Q9C009 403 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 FBRSQ9HAH7 460 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 LUC7LQ9NQ29 371 aaKnown RBP10.24□□□□□ -0.77
NR1I3-220ENST00000505005 PARVAQ9NVD7 372 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 DDIT4Q9NX09 232 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 IFNKQ9P0W0 207 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 DLGAP2Q9P1A6 1054 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
NR1I3-220ENST00000505005 ZDBF2Q9HCK1 2354 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 LRRC53A6NM62 1247 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 SIGLEC16A6NMB1 481 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 KCNU1A8MYU2 1149 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NEDD8-MDP1E9PL57 170 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 F5H5T6 163 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NRG2O14511 850 aaPredicted RBP10.23□□□□□ -0.77
NR1I3-220ENST00000505005 RTN2O75298 545 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 PENKP01210 267 aaPredicted RBP10.23□□□□□ -0.77
NR1I3-220ENST00000505005 ASLP04424 464 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DCNP07585 359 aaKnown RBP10.23□□□□□ -0.77
NR1I3-220ENST00000505005 HTR7P34969 479 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DPP6P42658 865 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DGKEP52429 567 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 ZXDBP98169 803 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 FMO1Q01740 532 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DEUP1Q05D60 604 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 SULT2A1Q06520 285 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 CLEC16AQ2KHT3 1053 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 PTPN20Q4JDL3 420 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 TAF3Q5VWG9 929 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NAA35Q5VZE5 725 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DCUN1D2Q6PH85 259 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 SARM1Q6SZW1 724 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 FAM183BPQ6ZVS7 135 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 STRADAQ7RTN6 431 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 BHLHA9Q7RTU4 235 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 IRF2BP2Q7Z5L9 587 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 ANKS1BQ7Z6G8 1248 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 XYLT1Q86Y38 959 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 ETFBKMTQ8IXQ9 262 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DEFB106AQ8N104 65 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 TERB1Q8NA31 727 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 KDM1BQ8NB78 822 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 OR8K1Q8NGG5 319 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 ATOH1Q92858 354 aaPredicted RBP10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NT5C3BQ969T7 300 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 FAM122AQ96E09 287 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 SLC39A13Q96H72 371 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NAP1L5Q96NT1 182 aaPredicted RBP10.23□□□□□ -0.77
NR1I3-220ENST00000505005 HAPLN3Q96S86 360 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 DNAJC17Q9NVM6 304 aaKnown RBP10.23□□□□□ -0.77
NR1I3-220ENST00000505005 ZSCAN32Q9NX65 697 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 SFMBT1Q9UHJ3 866 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NUDT5Q9UKK9 219 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 RAB23Q9ULC3 237 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 PLA2G4CQ9UP65 541 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 NAALADL1Q9UQQ1 740 aa10.23□□□□□ -0.77
NR1I3-220ENST00000505005 CXorf51AA0A1B0GTR3 108 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 M0QYT0 321 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 PI15O43692 258 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 GREM1O60565 184 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 TULP3O75386 442 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 RNF8O76064 485 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 PDGFBP01127 241 aaPredicted RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 IGLV3-25P01717 112 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 HMBSP08397 361 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 HNRNPLP14866 589 aaKnown RBP eCLIP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 CD72P21854 359 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 HNRNPH3P31942 346 aaKnown RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 RDXP35241 583 aaKnown RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 ETFBP38117 255 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 PBX1P40424 430 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 OPRD1P41143 372 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 PTPN9P43378 593 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 APBA1Q02410 837 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 STARD3Q14849 445 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 TDRD12Q587J7 1177 aaKnown RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 C10orf76Q5T2E6 689 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 TPGS1Q6ZTW0 290 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 TMEM25Q86YD3 366 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 AHI1Q8N157 1196 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 ZNF687Q8N1G0 1237 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 TXLNBQ8N3L3 684 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 GPR161Q8N6U8 529 aaKnown RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 ST13P5Q8NFI4 369 aaPredicted RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 BAP1Q92560 729 aa10.22□□□□□ -0.77
NR1I3-220ENST00000505005 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
NR1I3-220ENST00000505005 NPY6RQ99463 290 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms