RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 MRNIPQ6NTE8 343 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 MSANTD2Q6P1R3 559 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.34□□□□□ -1.87
TRBVA-201ENST00000498804 CLASRPQ8N2M8 674 aaKnown RBP3.34□□□□□ -1.87
TRBVA-201ENST00000498804 OR2C3Q8N628 320 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 IPO4Q8TEX9 1081 aaKnown RBP3.34□□□□□ -1.87
TRBVA-201ENST00000498804 TRMT61AQ96FX7 289 aaKnown RBP3.34□□□□□ -1.87
TRBVA-201ENST00000498804 P2RY11Q96G91 374 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 MARK4Q96L34 752 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 ELOVL1Q9BW60 279 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 MAGEB5Q9BZ81 275 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 STARD7Q9NQZ5 370 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 RXFP3Q9NSD7 469 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 ZBTB40Q9NUA8 1239 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 IGSF9Q9P2J2 1179 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 PHTF1Q9UMS5 762 aa3.34□□□□□ -1.87
TRBVA-201ENST00000498804 IGKV2D-30A0A075B6S6 120 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 B4DGG1 531 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 H3BNX3 289 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 CTIFO43310 598 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 CCNT2O60583 730 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 TAF5LO75529 589 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 FGF18O76093 207 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 SLC3A2P08195 630 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 PSG1P11464 419 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 MATN1P21941 496 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 EEF1GP26641 437 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 DUSP1P28562 367 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 IGHMBP2P38935 993 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 STAT6P42226 847 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ZNF84P51523 738 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 B4GALNT1Q00973 533 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ELF2Q15723 593 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 CNGA3Q16281 694 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ARL13BQ3SXY8 428 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 LEXMQ3ZCV2 418 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 MIDNQ504T8 468 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 EARS2Q5JPH6 523 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ASPHD1Q5U4P2 390 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 DAB2IPQ5VWQ8 1189 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 USP17L6PQ6QN14 398 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 C9orf47Q6ZRZ4 202 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 FAM57BQ71RH2 274 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 UEVLDQ8IX04 471 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 TXLNBQ8N3L3 684 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ABHD5Q8WTS1 349 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 NPIPB3Q92617 1050 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 PMM1Q92871 262 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 MSI2Q96DH6 328 aaKnown RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 LYZL4Q96KX0 146 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 FAM234AQ9H0X4 552 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 CDCP1Q9H5V8 836 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ARNT2Q9HBZ2 717 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ASNSD1Q9NWL6 643 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 WWOXQ9NZC7 414 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 TMOD4Q9NZQ9 345 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 SQORQ9Y6N5 450 aa3.33□□□□□ -1.88
TRBVA-201ENST00000498804 TTBK1Q5TCY1 1321 aaPredicted RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 ZNF335Q9H4Z2 1342 aaPredicted RBP3.33□□□□□ -1.88
TRBVA-201ENST00000498804 GXYLT2A0PJZ3 443 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 F8W810 466 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 J3KTA2 159 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 KIF3BO15066 747 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 ZSCAN9O15535 394 aaPredicted RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 COQ9O75208 318 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 TOMM40O96008 361 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 CRYABP02511 175 aaKnown RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 TFEBP19484 476 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 ABCB4P21439 1286 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 MMP8P22894 467 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 RPS6KB1P23443 525 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 SERPINB3P29508 390 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 IL6STP40189 918 aaPredicted RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 HSPA7P48741 367 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 VPS41P49754 854 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 AGTR2P50052 363 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 TBX4P57082 545 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 FAM3BP58499 235 aaPredicted RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 IFIT5Q13325 482 aaKnown RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 MTX1Q13505 466 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 GRM4Q14833 912 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 PGM5Q15124 567 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 GLE1Q53GS7 698 aaKnown RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 KLHL22Q53GT1 634 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 CCDC144NLQ6NUI1 221 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 XRRA1Q6P2D8 792 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 TLDC1Q6P9B6 456 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 ZNF793Q6ZN11 406 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 RBM44Q6ZP01 1051 aaKnown RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 COLCA1Q6ZS62 124 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 BEND5Q7L4P6 421 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 CCAR1Q8IX12 1150 aaKnown RBP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 MMP21Q8N119 569 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 EXD3Q8N9H8 876 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 OR1N1Q8NGS0 311 aa3.32□□□□□ -1.88
TRBVA-201ENST00000498804 AKAP1Q92667 903 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRBVA-201ENST00000498804 CELF1Q92879 486 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms