RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 HSD3B7Q9H2F3 369 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 POLMQ9NP87 494 aaPredicted RBP21.47■■□□□ 1.03
COL9A2-211ENST00000496215 PARD6AQ9NPB6 346 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 ASNSD1Q9NWL6 643 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 EBF1Q9UH73 591 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 FBXO10Q9UK96 956 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 SLC27A6Q9Y2P4 619 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 STARD13Q9Y3M8 1113 aa21.47■■□□□ 1.03
COL9A2-211ENST00000496215 MYO18AQ92614 2054 aaKnown RBP21.46■■□□□ 1.03
COL9A2-211ENST00000496215 SPAG17Q6Q759 2223 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 PRRT4C9JH25 899 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 TSPAN3O60637 253 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 HSF2BPO75031 334 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 ALDH1A2O94788 518 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 LSM8O95777 96 aaKnown RBP21.46■■□□□ 1.03
COL9A2-211ENST00000496215 ERBB2P04626 1255 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 GLI1P08151 1106 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 PTMSP20962 102 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 UBXN1Q04323 297 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 TAF5Q15542 800 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 EFHC1Q5JVL4 640 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 SYPL2Q5VXT5 272 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 EGFLAMQ63HQ2 1017 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 OR6B2Q6IFH4 312 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 OLFML1Q6UWY5 402 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 ANKS1BQ7Z6G8 1248 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 NOP9Q86U38 636 aaKnown RBP21.46■■□□□ 1.03
COL9A2-211ENST00000496215 NEK11Q8NG66 645 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 SPAG5Q96R06 1193 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 FAM204AQ9H8W3 233 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 NLRC4Q9NPP4 1024 aa21.46■■□□□ 1.03
COL9A2-211ENST00000496215 EPHB6O15197 1021 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 IRAK2O43187 625 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 ACSL4O60488 711 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 ADAM23O75077 832 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 GFPT2O94808 682 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 APOEP02649 317 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 ATP1A3P13637 1013 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 HOXD9P28356 352 aaPredicted RBP21.45■■□□□ 1.02
COL9A2-211ENST00000496215 CDH5P33151 784 aaPredicted RBP21.45■■□□□ 1.02
COL9A2-211ENST00000496215 JAM2P57087 298 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 DCAF6Q58WW2 860 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 RASSF3Q86WH2 238 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 CHPFQ8IZ52 775 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 MDGA1Q8NFP4 955 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 AZIN2Q96A70 460 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 SLC2A13Q96QE2 648 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 SLC2A11Q9BYW1 496 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 TPSD1Q9BZJ3 242 aa21.45■■□□□ 1.02
COL9A2-211ENST00000496215 TCRBV21S2A2A0A5A6 115 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 SMTNL1A8MU46 457 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 GFRA2O00451 464 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 DAB1O75553 588 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 TRUB2O95900 331 aaKnown RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 MOCS2O96007 188 aaPredicted RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 IGLV3-25P01717 112 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 HOXB2P14652 356 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 NTSR1P30989 418 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 SOX5P35711 763 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 FAM133BQ5BKY9 247 aaKnown RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 SDE2Q6IQ49 451 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 SLC26A9Q7LBE3 791 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 APTXQ7Z2E3 356 aaKnown RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 ZNF677Q86XU0 584 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 ZDHHC17Q8IUH5 632 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 DHX40Q8IX18 779 aaKnown RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 FAM160A2Q8N612 972 aaPredicted RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 MSANTD4Q8NCY6 345 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 DDX1Q92499 740 aaKnown RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 SLC39A13Q96H72 371 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 ERGIC2Q96RQ1 377 aa21.44■■□□□ 1.02
COL9A2-211ENST00000496215 DDX50Q9BQ39 737 aaKnown RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 IRX2Q9BZI1 471 aaPredicted RBP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 BCCIPQ9P287 314 aaKnown RBP eCLIP21.44■■□□□ 1.02
COL9A2-211ENST00000496215 LAMA1P25391 3075 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 TYW5A2RUC4 315 aaKnown RBP21.43■■□□□ 1.02
COL9A2-211ENST00000496215 LRRC10BA6NIK2 292 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 GRAP2O75791 330 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 MMEP08473 750 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 WASP42768 502 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 ZNF165P49910 485 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 CDK17Q00537 523 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 SLC6A3Q01959 620 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 EIF4HQ15056 248 aaKnown RBP21.43■■□□□ 1.02
COL9A2-211ENST00000496215 GEN1Q17RS7 908 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 RFWD3Q6PCD5 774 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 CACNA2D4Q7Z3S7 1137 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 DEFB106AQ8N104 65 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 UCMAQ8WVF2 138 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 TMA16Q96EY4 203 aaKnown RBP21.43■■□□□ 1.02
COL9A2-211ENST00000496215 DDIT4Q9NX09 232 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 NOCTQ9UK39 431 aaKnown RBP21.43■■□□□ 1.02
COL9A2-211ENST00000496215 CLEC4EQ9ULY5 219 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 MUC22E2RYF6 1773 aaPredicted RBP21.43■■□□□ 1.02
COL9A2-211ENST00000496215 SDK1Q7Z5N4 2213 aa21.43■■□□□ 1.02
COL9A2-211ENST00000496215 GOLGA6L7A0A1B0GV03 622 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 SYCE3A1L190 88 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 DCLK1O15075 740 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 SLC6A4P31645 630 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 STAT1P42224 750 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms