RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 TIMM44O43615 452 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 TSPAN3O60637 253 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 RHOBTB1O94844 696 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 PNMA6AP0CW24 399 aaPredicted RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 HOXB2P14652 356 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 BYSLQ13895 437 aaKnown RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 EIF4HQ15056 248 aaKnown RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 SYPL2Q5VXT5 272 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 EGFLAMQ63HQ2 1017 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 ANKS1BQ7Z6G8 1248 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 ZDHHC17Q8IUH5 632 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 ZNF557Q8N988 423 aaPredicted RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 C1orf131Q8NDD1 294 aaKnown RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 MDGA1Q8NFP4 955 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 P2RY11Q96G91 374 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 SLC39A13Q96H72 371 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 PIWIL1Q96J94 861 aaKnown RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 FCRL2Q96LA5 508 aaPredicted RBP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 SYNCQ9H7C4 482 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 ZDHHC4Q9NPG8 344 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 BCCIPQ9P287 314 aaKnown RBP eCLIP17.73■□□□□ 0.43
COMMD3-214ENST00000496071 HCN2Q9UL51 889 aa17.73■□□□□ 0.43
COMMD3-214ENST00000496071 RALGAPA1Q6GYQ0 2036 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 SPAG17Q6Q759 2223 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 TCRBV21S2A2A0A5A6 115 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 F8VZ95 297 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 FOXD2O60548 495 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-214ENST00000496071 HSF2BPO75031 334 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 TRUB2O95900 331 aaKnown RBP17.72■□□□□ 0.43
COMMD3-214ENST00000496071 APOEP02649 317 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 HOXD9P28356 352 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-214ENST00000496071 GBP1P32455 592 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 CDH5P33151 784 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-214ENST00000496071 CDK17Q00537 523 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 ELF2Q15723 593 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 DCAF6Q58WW2 860 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 PIK3R6Q5UE93 754 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 OR6B2Q6IFH4 312 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 TAC4Q86UU9 113 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 KBTBD6Q86V97 674 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 GABRG3Q99928 467 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 TPSD1Q9BZJ3 242 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 GANQ9H2C0 597 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.72■□□□□ 0.43
COMMD3-214ENST00000496071 TJP2Q9UDY2 1190 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 SLC12A6Q9UHW9 1150 aa17.72■□□□□ 0.43
COMMD3-214ENST00000496071 EP300Q09472 2414 aaPredicted RBP17.72■□□□□ 0.43
COMMD3-214ENST00000496071 TYW5A2RUC4 315 aaKnown RBP17.71■□□□□ 0.43
COMMD3-214ENST00000496071 LGALS16A8MUM7 142 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 SLC2A3P11169 496 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 ZNF18P17022 549 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 WASP42768 502 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
COMMD3-214ENST00000496071 SLC6A3Q01959 620 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 SPEM2Q0P670 501 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 NCAPHQ15003 741 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 GEN1Q17RS7 908 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 PLK5Q496M5 336 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
COMMD3-214ENST00000496071 ZNF677Q86XU0 584 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 DEFB106AQ8N104 65 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 PGBD3Q8N328 593 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 MSANTD4Q8NCY6 345 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 OLIG1Q8TAK6 271 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 ADAM32Q8TC27 787 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 WFIKKN2Q8TEU8 576 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 PCMTD1Q96MG8 357 aaPredicted RBP17.71■□□□□ 0.43
COMMD3-214ENST00000496071 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 ACOX2Q99424 681 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 FAM207AQ9NSI2 230 aaPredicted RBP17.71■□□□□ 0.43
COMMD3-214ENST00000496071 ELOVL2Q9NXB9 296 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 USP18Q9UMW8 372 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 SIK3Q9Y2K2 1263 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 PCDHGA5Q9Y5G8 931 aa17.71■□□□□ 0.43
COMMD3-214ENST00000496071 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 SMTNL1A8MU46 457 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 EPN2O95208 641 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 LSM8O95777 96 aaKnown RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 IGLV3-25P01717 112 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 ERBB2P04626 1255 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 TGM1P22735 817 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 LMNB2Q03252 620 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 ARID5AQ03989 594 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 UBXN1Q04323 297 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 MTA1Q13330 715 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 EIF4EBP2Q13542 120 aaPredicted RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 SYCP1Q15431 976 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 TAF5Q15542 800 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 CSRP2Q16527 193 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 PTPN20Q4JDL3 420 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 OLFML1Q6UWY5 402 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 FAM183BPQ6ZVS7 135 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 SLC26A9Q7LBE3 791 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 AOPEPQ8N6M6 819 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 ATP6V0D2Q8N8Y2 350 aa17.7■□□□□ 0.42
COMMD3-214ENST00000496071 HJURPQ8NCD3 748 aaPredicted RBP17.7■□□□□ 0.42
COMMD3-214ENST00000496071 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms