RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 APOEP02649 317 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 HMGA1P17096 107 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 GOT1P17174 413 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 KLRC2P26717 231 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 TBX4P57082 545 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 TPI1P60174 286 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 EFEMP1Q12805 493 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 PTK6Q13882 451 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 OASLQ15646 514 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 TRIP4Q15650 581 aaPredicted RBP25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 ACBD5Q5T8D3 534 aaPredicted RBP25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 DUPD1Q68J44 220 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 PYROXD2Q8N2H3 581 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 PQLC3Q8N755 202 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 PLD5Q8N7P1 536 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 MRPL43Q8N983 215 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 CCDC89Q8N998 374 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 CASKIN2Q8WXE0 1202 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 IFT81Q8WYA0 676 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 TGS1Q96RS0 853 aaKnown RBP25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 MARCH2Q9P0N8 246 aa25.26■■□□□ 1.63
PPP1R3F-205ENST00000495799 TGM5O43548 720 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 CREB3O43889 395 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 TLR5O60602 858 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 C1RP00736 705 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 EIF3EP60228 445 aaKnown RBP25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 SHHQ15465 462 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 PLPP4Q5VZY2 271 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 PDE12Q6L8Q7 609 aaKnown RBP25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 PDZD4Q76G19 769 aaPredicted RBP25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 RTL10Q7L3V2 364 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 PSMG2Q969U7 264 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 FAM118BQ9BPY3 351 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 FAM129AQ9BZQ8 928 aa25.25■■□□□ 1.63
PPP1R3F-205ENST00000495799 ZSCAN5CA6NGD5 496 aaPredicted RBP25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 MSI1O43347 362 aaKnown RBP25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 GLUD1P00367 558 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 LRG1P02750 347 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 TUBP50607 506 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 ERVFC1P60507 584 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 SEMA3BQ13214 749 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 HLTFQ14527 1009 aaKnown RBP eCLIP25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 HECTD3Q5T447 861 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 LILRA6Q6PI73 481 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 KLHDC10Q6PID8 442 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 RFX8Q6ZV50 586 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 ATP6V0D2Q8N8Y2 350 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 SLC39A13Q96H72 371 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 ARHGEF4Q9NR80 690 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 NUDT5Q9UKK9 219 aa25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 HBS1LQ9Y450 684 aaKnown RBP25.24■■□□□ 1.63
PPP1R3F-205ENST00000495799 ESYT3A0FGR9 886 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 C2orf71A6NGG8 1288 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 NDC80O14777 642 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 PECAM1P16284 738 aaPredicted RBP25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 RING1Q06587 406 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 C1orf228Q6PIY5 440 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 DNAJB7Q7Z6W7 309 aaPredicted RBP25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 ELMOD1Q8N336 334 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 ALLCQ8N6M5 410 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 HINFPQ9BQA5 517 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 NACA2Q9H009 215 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 TMPRSS4Q9NRS4 437 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 OR12D3Q9UGF7 316 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 ASIC3Q9UHC3 531 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 DNMT3LQ9UJW3 386 aa25.23■■□□□ 1.63
PPP1R3F-205ENST00000495799 CFAP69A5D8W1 941 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 ZNF840PA6NDX5 716 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 ZNF189O75820 626 aaPredicted RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 CA3P07451 260 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 RBP3P10745 1247 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 AMPD1P23109 780 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 ATP5C1P36542 298 aaKnown RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 CARSP49589 748 aaKnown RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 XRCC4Q13426 336 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 DPYSQ14117 519 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 PABPC1LQ4VXU2 614 aaKnown RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 EMBQ6PCB8 327 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 KREMEN2Q8NCW0 462 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 BBOF1Q8ND07 529 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 MICAL1Q8TDZ2 1067 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 RSAD2Q8WXG1 361 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 TRIM31Q9BZY9 425 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 DPH5Q9H2P9 285 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 ANLNQ9NQW6 1124 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 SAE1Q9UBE0 346 aaPredicted RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 HEY1Q9Y5J3 304 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 KCNU1A8MYU2 1149 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 H7C0C1 242 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 SGK1O00141 431 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 ATP5OP48047 213 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 NRG1Q02297 640 aaPredicted RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 NCBP2-AS2Q69YL0 99 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 CDKL3Q8IVW4 592 aaPredicted RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 FCRL2Q96LA5 508 aaPredicted RBP25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 MAGEB5Q9BZ81 275 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 RAD54BQ9Y620 910 aa25.22■■□□□ 1.63
PPP1R3F-205ENST00000495799 GBF1Q92538 1859 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 SLC12A8A0AV02 714 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 PAGE1O75459 146 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms