RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 GTSE1Q9NYZ3 720 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 UVRAGQ9P2Y5 699 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 STOML2Q9UJZ1 356 aa17.77■□□□□ 0.44
HDAC6-235ENST00000495515 C5orf42Q9H799 3197 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 SOWAHDA6NJG2 315 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 PI4K2BG5E9Z4 385 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 MAN2B1O00754 1011 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 ACSL4O60488 711 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 ENDOD1O94919 500 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 NDUFA10O95299 355 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 LCA5LO95447 670 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 MOCS2O96007 188 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-235ENST00000495515 CYBBP04839 570 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 PSMA2P25787 234 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 CXCR3P49682 368 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 GAD2Q05329 585 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 DHCR24Q15392 516 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 MLF2Q15773 248 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-235ENST00000495515 CDO1Q16878 200 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 ARL13BQ3SXY8 428 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 ACBD5Q5T8D3 534 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-235ENST00000495515 TRNP1Q6NT89 227 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 RALGPS2Q86X27 583 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-235ENST00000495515 TXLNBQ8N3L3 684 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 CPXM2Q8N436 756 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 CENPIQ92674 756 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-235ENST00000495515 NUP85Q9BW27 656 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 SPHK2Q9NRA0 654 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 HEBP1Q9NRV9 189 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 PIGVQ9NUD9 493 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 CTTNBP2NLQ9P2B4 639 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 PIAS3Q9Y6X2 628 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 BDP1A6H8Y1 2624 aa17.76■□□□□ 0.43
HDAC6-235ENST00000495515 KCNU1A8MYU2 1149 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 RNF8O76064 485 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 CYP17A1P05093 508 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 ADH5P11766 374 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 C15orf59Q2T9L4 293 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-235ENST00000495515 LY6G5CQ5SRR4 150 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 OTUD1Q5VV17 481 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-235ENST00000495515 RHBDF2Q6PJF5 856 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 TRIM67Q6ZTA4 783 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 BNIPLQ7Z465 357 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 FAM217AQ8IXS0 508 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 FAM172AQ8WUF8 416 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 C1QTNF1Q9BXJ1 281 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 PACSIN1Q9BY11 444 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 CA14Q9ULX7 337 aa17.75■□□□□ 0.43
HDAC6-235ENST00000495515 HELZP42694 1942 aaKnown RBP17.74■□□□□ 0.43
HDAC6-235ENST00000495515 TYW5A2RUC4 315 aaKnown RBP17.74■□□□□ 0.43
HDAC6-235ENST00000495515 MYO1FO00160 1098 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 CCP110O43303 1012 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 TFE3P19532 575 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-235ENST00000495515 KRT83P78385 493 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 ACAP1Q15027 740 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 ANO4Q32M45 955 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 TPGS1Q6ZTW0 290 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 TPRG1Q6ZUI0 275 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 SIX5Q8N196 739 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 TTC8Q8TAM2 541 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 ZNF564Q8TBZ8 553 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-235ENST00000495515 ARHGEF26Q96DR7 871 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 TKTL2Q9H0I9 626 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 ARHGEF38Q9NXL2 777 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 MARK1Q9P0L2 795 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 IP6K2Q9UHH9 426 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 ANAPC7Q9UJX3 599 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
HDAC6-235ENST00000495515 PCDHA13Q9Y5I0 950 aa17.74■□□□□ 0.43
HDAC6-235ENST00000495515 MYO10Q9HD67 2058 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 SPECC1L-ADORA2AF8WAN1 911 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 HOXC11O43248 304 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-235ENST00000495515 COL9A1P20849 921 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 CTHP32929 405 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 GJA4P35212 333 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 PIGHQ14442 188 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-235ENST00000495515 PREPLQ4J6C6 727 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-235ENST00000495515 MPPE1Q53F39 396 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 RAD9BQ6WBX8 426 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 ZNF852Q6ZMS4 543 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 CHSY1Q86X52 802 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 FAM131BQ86XD5 332 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 TMEM25Q86YD3 366 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 TMEM139Q8IV31 216 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 RFFLQ8WZ73 363 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 TMA16Q96EY4 203 aaKnown RBP17.73■□□□□ 0.43
HDAC6-235ENST00000495515 XPO6Q96QU8 1125 aaKnown RBP17.73■□□□□ 0.43
HDAC6-235ENST00000495515 BBS2Q9BXC9 721 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 ADAM33Q9BZ11 813 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 MFSD1Q9H3U5 465 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 CALCOCO1Q9P1Z2 691 aa17.73■□□□□ 0.43
HDAC6-235ENST00000495515 OTOL1A6NHN0 477 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-235ENST00000495515 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-235ENST00000495515 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 F5H5T6 163 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
HDAC6-235ENST00000495515 AIF1P55008 147 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 HDAC4P56524 1084 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms