RNA–Protein interactions for RNA: ENST00000495000.1

C1orf61-222, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-222	ENST00000495000	SYCP1	Q15431	976 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	TAF5	Q15542	800 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	GEN1	Q17RS7	908 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	PTPN20	Q4JDL3	420 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	DCAF6	Q58WW2	860 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	EFHC1	Q5JVL4	640 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	RFWD3	Q6PCD5	774 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	CACNA2D4	Q7Z3S7	1137 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	ANKS1B	Q7Z6G8	1248 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	KBTBD6	Q86V97	674 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	RASSF3	Q86WH2	238 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	DEFB106A	Q8N104	65 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	PGBD3	Q8N328	593 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	FAM160A2	Q8N612	972 aa	Predicted RBP	11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	TMEM35B	Q8NCS4	154 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	MDGA1	Q8NFP4	955 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	HMGB4	Q8WW32	186 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	TMA16	Q96EY4	203 aa	Known RBP	11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	FCRL2	Q96LA5	508 aa	Predicted RBP	11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	ACOX2	Q99424	681 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	DDX50	Q9BQ39	737 aa	Known RBP	11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	FAM204A	Q9H8W3	233 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	NLRC4	Q9NPP4	1024 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	HCN2	Q9UL51	889 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	CLEC4E	Q9ULY5	219 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	INVS	Q9Y283	1065 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	SIK3	Q9Y2K2	1263 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC27A6	Q9Y2P4	619 aa		11.26	□□□□□ -0.61
C1orf61-222	ENST00000495000	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	DCLK1	O15075	740 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	EPHB6	O15197	1021 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	IRAK2	O43187	625 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	TBL1X	O60907	577 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	HSF2BP	O75031	334 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	TRUB2	O95900	331 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	APOE	P02649	317 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	RET	P07949	1114 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	GLI1	P08151	1106 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	ATP1A3	P13637	1013 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	ZNF18	P17022	549 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC6A4	P31645	630 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SGSH	P51688	502 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	PITX1	P78337	314 aa	Predicted RBP	11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	CDK17	Q00537	523 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC6A3	Q01959	620 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SPEM2	Q0P670	501 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	USP39	Q53GS9	565 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	FAM133B	Q5BKY9	247 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	NOP9	Q86U38	636 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	NEK11	Q8NG66	645 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	UCMA	Q8WVF2	138 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	DDX1	Q92499	740 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	AZIN2	Q96A70	460 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	ERLEC1	Q96DZ1	483 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC39A13	Q96H72	371 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC2A13	Q96QE2	648 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SPAG5	Q96R06	1193 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	BPIFA3	Q9BQP9	254 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC2A11	Q9BYW1	496 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	HSD3B7	Q9H2F3	369 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	ASNSD1	Q9NWL6	643 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	CACNA2D2	Q9NY47	1150 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	COX16	Q9P0S2	106 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	USP18	Q9UMW8	372 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	DAAM1	Q9Y4D1	1078 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	RAD54B	Q9Y620	910 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	SPAG17	Q6Q759	2223 aa		11.25	□□□□□ -0.61
C1orf61-222	ENST00000495000	TYW5	A2RUC4	315 aa	Known RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	SMTNL1	A8MU46	457 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	GFRA2	O00451	464 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	ZBTB24	O43167	697 aa	Predicted RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	DAB1	O75553	588 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	IGLV3-25	P01717	112 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	MME	P08473	750 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	GBP1	P32455	592 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	CDH5	P33151	784 aa	Predicted RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	SOX5	P35711	763 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	STAT1	P42224	750 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	JAM2	P57087	298 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	ARID5A	Q03989	594 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	KLHL40	Q2TBA0	621 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	PIK3R6	Q5UE93	754 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	NADSYN1	Q6IA69	706 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	OLFML1	Q6UWY5	402 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	ERICH1	Q86X53	443 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	ZDHHC17	Q8IUH5	632 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	DHX40	Q8IX18	779 aa	Known RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	GPR161	Q8N6U8	529 aa	Known RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	HJURP	Q8NCD3	748 aa	Predicted RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	MSANTD4	Q8NCY6	345 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	EPS8L1	Q8TE68	723 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	SLC20A1	Q8WUM9	679 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	RNF34	Q969K3	372 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	C18orf8	Q96DM3	657 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	CIPC	Q9C0C6	399 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	NUCKS1	Q9H1E3	243 aa	Known RBP	11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	DDIT4	Q9NX09	232 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	STIM2	Q9P246	746 aa		11.24	□□□□□ -0.61
C1orf61-222	ENST00000495000	XPO7	Q9UIA9	1087 aa	Known RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms