RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 ARHGAP18Q8N392 663 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 LINC01465Q8N7H1 131 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 PPTC7Q8NI37 304 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 CXorf38Q8TB03 319 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 FAM172AQ8WUF8 416 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 DEPDC1BQ8WUY9 529 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 TRIB2Q92519 343 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 CENPIQ92674 756 aaPredicted RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PDZD7Q9H5P4 517 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
RFC4-214ENST00000494047 NRDE2Q9H7Z3 1164 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 IL1RAPL1Q9NZN1 696 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 CYTH4Q9UIA0 394 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 DCTN4Q9UJW0 460 aa11.86□□□□□ -0.51
RFC4-214ENST00000494047 A0A0A0MRY4 1105 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 RRN3P2A6NIE6 340 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SDR42E2A6NKP2 422 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 E5RJQ4 531 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 H3BRJ5 948 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 FCHO1O14526 889 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 PSMG1O95456 288 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 BPGMP07738 259 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 ADORA2AP29274 412 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SERPINB3P29508 390 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 PGM1P36871 562 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 AP1B1Q10567 949 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 STX3Q13277 289 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 PDK1Q15118 436 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 GOLGA7BQ2TAP0 167 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 PKDCCQ504Y2 493 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SEZ6Q53EL9 994 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 FSCBQ5H9T9 825 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 INTS6LQ5JSJ4 861 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 OLFML2BQ68BL8 750 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 LRRC8BQ6P9F7 803 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 PRUNE1Q86TP1 453 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SETD3Q86TU7 594 aaPredicted RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 ZC3H18Q86VM9 953 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 LRRC71Q8N4P6 559 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 EMC1Q8N766 993 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 MICAL1Q8TDZ2 1067 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 TFB1MQ8WVM0 346 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 ELMO3Q96BJ8 720 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 CMTM5Q96DZ9 223 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 CFAP36Q96G28 342 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 TNIP3Q96KP6 325 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SPATA13Q96N96 652 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 TRAPPC9Q96Q05 1148 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 WDR83Q9BRX9 315 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 SNRNP25Q9BV90 132 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 OSBPL1AQ9BXW6 950 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 FAM192AQ9GZU8 254 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.85□□□□□ -0.51
RFC4-214ENST00000494047 NGRNQ9NPE2 291 aaKnown RBP11.85□□□□□ -0.51
RFC4-214ENST00000494047 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 PDP2Q9P2J9 529 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SLC17A7Q9P2U7 560 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 STAP1Q9ULZ2 295 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 SOX13Q9UN79 622 aa11.85□□□□□ -0.51
RFC4-214ENST00000494047 MAGEB16A2A368 324 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 KPNA7A9QM74 516 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 TM7SF2O76062 418 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 SERPINE1P05121 402 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 CD48P09326 243 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 TXNP10599 105 aaKnown RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 BGNP21810 368 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 CYP2F1P24903 491 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 GLUD2P49448 558 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 ASPHQ12797 758 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 EFTUD2Q15029 972 aaKnown RBP eCLIP11.84□□□□□ -0.511e-5■■■□□ 16.7
RFC4-214ENST00000494047 AMHR2Q16671 573 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 HSDL1Q3SXM5 330 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 TEX44Q53QW1 395 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 SPANXN3Q5MJ09 141 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 METTL21CQ5VZV1 264 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 EEF1DP3Q658K8 133 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 CYP4V2Q6ZWL3 525 aaPredicted RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 ARMCX2Q7L311 632 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 STKLD1Q8NE28 680 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 ARMC2Q8NEN0 867 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 PIWIL2Q8TC59 973 aaKnown RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 ACSF2Q96CM8 615 aaPredicted RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 MRRFQ96E11 262 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms