RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CXCL16Q9H2A7 254 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CWH43Q9H720 699 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 PLAGL2Q9UPG8 496 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 DNAJC16Q9Y2G8 782 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 PCDHA5Q9Y5H7 936 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 A0A0B4J269 797 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 B4GALT3O60512 393 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 WFS1O76024 890 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 LINC00271P0C7V0 271 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 MTHFD1P11586 935 aaKnown RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 GRK2P25098 689 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 MZF1P28698 734 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 HOXD13P35453 343 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 SCTRP47872 440 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 KRT6CP48668 564 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ACOT2P49753 483 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CTC1Q2NKJ3 1217 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 METTL2BQ6P1Q9 378 aaKnown RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 RFPL4BQ6ZWI9 263 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 VASH1Q7L8A9 365 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 HS2ST1Q7LGA3 356 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF280BQ86YH2 543 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CLVS1Q8IUQ0 354 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 COLGALT1Q8NBJ5 622 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 OR8H1Q8NGG4 311 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF507Q8TCN5 953 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ARL5BQ96KC2 179 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF558Q96NG5 402 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 DHRS9Q9BPW9 319 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 NDST4Q9H3R1 872 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 TIMMDC1Q9NPL8 285 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 AAASQ9NRG9 546 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 MIOSQ9NXC5 875 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CTTNBP2NLQ9P2B4 639 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 PCDHB12Q9Y5F1 795 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 SNX8Q9Y5X2 465 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CLIC2O15247 247 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 DDHD2O94830 711 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 INMTO95050 263 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 BPNT1O95861 308 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 HLA-DRAP01903 254 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ITGB3P05106 788 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ABCB1P08183 1280 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ADSSP30520 456 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 BMPR1AP36894 532 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 RELAQ04206 551 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 Q3ZCU0 254 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 SGO2Q562F6 1265 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF658Q5TYW1 1059 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 PHLDB3Q6NSJ2 640 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 WDR93Q6P2C0 686 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 FAM122CQ6P4D5 195 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 KCNT2Q6UVM3 1135 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF473Q8WTR7 871 aaKnown RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 MYLIPQ8WY64 445 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 RMDN1Q96DB5 314 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 FAM213AQ9BRX8 229 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 C11orf84Q9BUA3 381 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ADNPQ9H2P0 1102 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 RPF1Q9H9Y2 349 aaKnown RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 SDHAF3Q9NRP4 125 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 HACD3Q9P035 362 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 EDARQ9UNE0 448 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ANGPTL3Q9Y5C1 460 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 TRIP11Q15643 1979 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 CASTOR2A6NHX0 329 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 GOLGA8RI6L899 631 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 PTGESO14684 152 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 MAP3K13O43283 966 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 PRMT3O60678 531 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 GNA14O95837 355 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 SLC4A1P02730 911 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 THP07101 528 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ALOX5P09917 674 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 IGFBP4P22692 258 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 OR1G1P47890 313 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ALDH7A1P49419 539 aaKnown RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 CYP2J2P51589 502 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ARHGDIBP52566 201 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 LIMK1P53667 647 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 MLLT6P55198 1093 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 BCAR1P56945 870 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 SPAG1Q07617 926 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 KNOP1Q1ED39 458 aaKnown RBP11.98□□□□□ -0.49
BRCA1-222ENST00000493919 BMT2Q1RMZ1 405 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 CNPY1Q3B7I2 92 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 KIAA1841Q6NSI8 718 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 CFAP161Q6P656 301 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 ALDH16A1Q8IZ83 802 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 OR8H2Q8N162 312 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
BRCA1-222ENST00000493919 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms