RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TCTN1Q2MV58 587 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 CTXN3Q4LDR2 81 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 FAM171A1Q5VUB5 890 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 C1orf53Q5VUE5 145 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 ZNF280DQ6N043 979 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 LEKR1Q6ZMV7 388 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 CTU1Q7Z7A3 348 aaKnown RBP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 PDIK1LQ8N165 341 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 TET1Q8NFU7 2136 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 TFB1MQ8WVM0 346 aaKnown RBP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 SCLYQ96I15 445 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 OXCT2Q9BYC2 517 aaPredicted RBP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 KLC2Q9H0B6 622 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 TMPRSS4Q9NRS4 437 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 ETNK2Q9NVF9 386 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 ABI2Q9NYB9 513 aaPredicted RBP14.52□□□□□ -0.08
PTPN7-216ENST00000492977 PCDHB5Q9Y5E4 795 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 TANC1Q9C0D5 1861 aa14.52□□□□□ -0.08
PTPN7-216ENST00000492977 SMIM23A6NLE4 172 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 E7EVH7 732 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 GOLGA8MH3BSY2 632 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 DCLK1O15075 740 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 IGLV3-25P01717 112 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TSHRP16473 764 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 CYP2C18P33260 490 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 MDH1P40925 334 aaKnown RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SLCO1A2P46721 670 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SLC11A1P49279 550 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 GATMP50440 423 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 ATN1P54259 1190 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 EIF4EBP2Q13542 120 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 PDK1Q15118 436 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 LONRF1Q17RB8 773 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 BTBD8Q5XKL5 378 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 HEATR6Q6AI08 1181 aaKnown RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TAC4Q86UU9 113 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SCN4BQ8IWT1 228 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 ZBED8Q8IZ13 594 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 PDCD7Q8N8D1 485 aaKnown RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 DQX1Q8TE96 717 aaKnown RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 FERMT1Q9BQL6 677 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 GPR62Q9BZJ7 368 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 FBXO44Q9H4M3 255 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 PPCSQ9HAB8 311 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 RAB6BQ9NRW1 208 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SLC12A6Q9UHW9 1150 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 ZMYND8Q9ULU4 1186 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 VWA8A3KMH1 1905 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TCRBV7S3A2A0A539 114 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TBKBP1A7MCY6 615 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 H7C4K7 107 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 CDH16O75309 829 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TMEM63AO94886 807 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 MAP3K6O95382 1288 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 GALTP07902 379 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 NRLP54845 237 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 CCL23P55773 120 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TPI1P60174 286 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 IFI35P80217 286 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 FOXK1P85037 733 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TLE2Q04725 743 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 FASTKD3Q14CZ7 662 aaKnown RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 BRMS1LQ5PSV4 323 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 FNBP1LQ5T0N5 605 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 FUT10Q6P4F1 479 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TAOK1Q7L7X3 1001 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 CEP57Q86XR8 500 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 NUP93Q8N1F7 819 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 RIBC1Q8N443 379 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-216ENST00000492977 PYROXD1Q8WU10 500 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 HTR3CQ8WXA8 447 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 EPAS1Q99814 870 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 TKTL2Q9H0I9 626 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 OSBPL2Q9H1P3 480 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 LGALS13Q9UHV8 139 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SCML2Q9UQR0 700 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SCN5AQ14524 2016 aa14.51□□□□□ -0.09
PTPN7-216ENST00000492977 SRRM3A6NNA2 597 aaPredicted RBP14.5□□□□□ -0.09
PTPN7-216ENST00000492977 I6L893 689 aaPredicted RBP14.5□□□□□ -0.09
PTPN7-216ENST00000492977 PPP1R12AO14974 1030 aaPredicted RBP14.5□□□□□ -0.09
PTPN7-216ENST00000492977 NCAM2O15394 837 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 MFSD11O43934 449 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 STK10O94804 968 aaKnown RBP14.5□□□□□ -0.09
PTPN7-216ENST00000492977 ERCC2P18074 760 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 PHBP35232 272 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 MMP13P45452 471 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 GLUD2P49448 558 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 GAD2Q05329 585 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 PRKD1Q15139 912 aaPredicted RBP14.5□□□□□ -0.09
PTPN7-216ENST00000492977 MON1AQ86VX9 555 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 VPS52Q8N1B4 723 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 LRRC43Q8N309 656 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 ARHGAP18Q8N392 663 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 TAB3Q8N5C8 712 aaPredicted RBP14.5□□□□□ -0.09
PTPN7-216ENST00000492977 ATP11CQ8NB49 1132 aa14.5□□□□□ -0.09
PTPN7-216ENST00000492977 MCUQ8NE86 351 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms