RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 FAM170AA1A519 330 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 MED7O43513 233 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 EPN2O95208 641 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 IGLV3-27P01718 113 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 NCAM1P13591 858 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 HOXB2P14652 356 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 GABRG2P18507 467 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 HOXD9P28356 352 aaPredicted RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 NTSR1P30989 418 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 SLC6A4P31645 630 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 GBP1P32455 592 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 HARS2P49590 506 aaKnown RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 TBX4P57082 545 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 PITX1P78337 314 aaPredicted RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 SF3A2Q15428 464 aaKnown RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 TAF5Q15542 800 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 PREPLQ4J6C6 727 aaPredicted RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 TCP11X2Q5H9J9 407 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 TMEM215Q68D42 235 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 NADSYN1Q6IA69 706 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 RFWD3Q6PCD5 774 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 TMEM110Q86TL2 294 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 TAC4Q86UU9 113 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 SLC47A2Q86VL8 602 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 CHPFQ8IZ52 775 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 ENOX1Q8TC92 643 aaKnown RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 DDI1Q8WTU0 396 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 STK32AQ8WU08 396 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 CPXM1Q96SM3 734 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 SLC6A17Q9H1V8 727 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
MDC1-207ENST00000492462 PLCB1Q9NQ66 1216 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 BCCIPQ9P287 314 aaKnown RBP eCLIP12.28□□□□□ -0.44
MDC1-207ENST00000492462 STOML2Q9UJZ1 356 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 SLC27A6Q9Y2P4 619 aa12.28□□□□□ -0.44
MDC1-207ENST00000492462 CEP192Q8TEP8 1941 aa12.27□□□□□ -0.44
MDC1-207ENST00000492462 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 GDF9O60383 454 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 ALDH1A2O94788 518 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 CYBBP04839 570 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 KLK7P49862 253 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 DRAP1Q14919 205 aaPredicted RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 CSRP2Q16527 193 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 MEA1Q16626 185 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 MAP7D1Q3KQU3 841 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 MPPE1Q53F39 396 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 USP39Q53GS9 565 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 FAM133BQ5BKY9 247 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 ADGRF1Q5T601 910 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 KLHDC7AQ5VTJ3 777 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 PRR23CQ6ZRP0 262 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 NUDT18Q6ZVK8 323 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 FAM71AQ8IYT1 594 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 PGBD3Q8N328 593 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 GPR161Q8N6U8 529 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 C1orf131Q8NDD1 294 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 WFDC5Q8TCV5 224 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 IPO4Q8TEX9 1081 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 SORCS1Q8WY21 1168 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 GOLGA1Q92805 767 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 LOXL4Q96JB6 756 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 FAM81BQ96LP2 452 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 GABRG3Q99928 467 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 LSM14BQ9BX40 385 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 VPS16Q9H269 839 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 CD93Q9NPY3 652 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 RXFP3Q9NSD7 469 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 FANCLQ9NW38 375 aa12.27□□□□□ -0.45
MDC1-207ENST00000492462 XPO7Q9UIA9 1087 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 MBD1Q9UIS9 605 aaPredicted RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 TNRC6BQ9UPQ9 1833 aaKnown RBP12.27□□□□□ -0.45
MDC1-207ENST00000492462 FRYQ5TBA9 3013 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 ACSL4O60488 711 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 LRP3O75074 770 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 NDUFV2P19404 249 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 SDHBP21912 280 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 EEF1GP26641 437 aaKnown RBP12.26□□□□□ -0.45
MDC1-207ENST00000492462 HLA-FP30511 346 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 P2RY2P41231 377 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 IL12RB1P42701 662 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 ACADSBP45954 432 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 LMNB2Q03252 620 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 PTK2Q05397 1052 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 RAPGEF1Q13905 1077 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 KRT31Q15323 416 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 CT47A1Q5JQC4 288 aaPredicted RBP12.26□□□□□ -0.45
MDC1-207ENST00000492462 PMS2CLQ68D20 193 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 TCEAL6Q6IPX3 200 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 TRMT11Q7Z4G4 463 aaKnown RBP12.26□□□□□ -0.45
MDC1-207ENST00000492462 TCEAL3Q969E4 200 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 TMA16Q96EY4 203 aaKnown RBP12.26□□□□□ -0.45
MDC1-207ENST00000492462 SLC39A13Q96H72 371 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 PPP1R13BQ96KQ4 1090 aa12.26□□□□□ -0.45
MDC1-207ENST00000492462 PRICKLE1Q96MT3 831 aaPredicted RBP12.26□□□□□ -0.45
MDC1-207ENST00000492462 NAA15Q9BXJ9 866 aaKnown RBP12.26□□□□□ -0.45
MDC1-207ENST00000492462 CALCOCO1Q9P1Z2 691 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms