RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TMEM196Q5HYL7 178 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 SH3PXD2AQ5TCZ1 1133 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NADSYN1Q6IA69 706 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 FSTL4Q6MZW2 842 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 SUGP1Q8IWZ8 645 aaKnown RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 ETFBKMTQ8IXQ9 262 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 FAM217AQ8IXS0 508 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 MSANTD4Q8NCY6 345 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NT5C3BQ969T7 300 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 CFAP57Q96MR6 1250 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 SERPINB11Q96P15 392 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 TBCBQ99426 244 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NPY6RQ99463 290 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 DNAJC7Q99615 494 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 TRIM62Q9BVG3 475 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NUCKS1Q9H1E3 243 aaKnown RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 ANLNQ9NQW6 1124 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 PIGVQ9NUD9 493 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 DDIT4Q9NX09 232 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.17□□□□□ -1.13e-10■□□□□ 8.6
SSR1-210ENST00000489567 ARIH1Q9Y4X5 557 aaPredicted RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 MYOFQ9NZM1 2061 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 F5P12259 2224 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 A0A087X0T9 212 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NEDD8-MDP1E9PL57 170 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 M0QYT0 321 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 HOXC11O43248 304 aaPredicted RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 TSPAN3O60637 253 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 MFAP3LO75121 409 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 MOCS2O96007 188 aaPredicted RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 ADH1CP00326 375 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 EGFP01133 1207 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 FTLP02792 175 aaPredicted RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 FAM228BP0C875 321 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 RFC1P35251 1148 aaPredicted RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 GSCP56915 257 aaPredicted RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 RPL7AP62424 266 aaKnown RBP8.17□□□□□ -1.1
SSR1-210ENST00000489567 FAM193AP78312 1265 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 CDK17Q00537 523 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NR1H3Q13133 447 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 NME3Q13232 169 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 CCINQ13939 588 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 TRIM14Q14142 442 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 GAS6Q14393 721 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 ARID5BQ14865 1188 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 FYB2Q5VWT5 728 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 RFWD3Q6PCD5 774 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 Q6ZS52 159 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 BNIPLQ7Z465 357 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 PHTF2Q8N3S3 785 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 C3orf20Q8ND61 904 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 OR8K1Q8NGG5 319 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 CLDN23Q96B33 292 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 CHP1Q99653 195 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 P2RY13Q9BPV8 354 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 BBS2Q9BXC9 721 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 DCLK3Q9C098 648 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 FAM204AQ9H8W3 233 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 ABHD10Q9NUJ1 306 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 RAPGEFL1Q9UHV5 662 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 STOML2Q9UJZ1 356 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 CLEC4EQ9ULY5 219 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 KMT2EQ8IZD2 1858 aa8.17□□□□□ -1.1
SSR1-210ENST00000489567 C2CD4BA6NLJ0 364 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 KCNU1A8MYU2 1149 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 ACSL4O60488 711 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
SSR1-210ENST00000489567 CALB1P05937 261 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 KRT3P12035 628 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 GZMAP12544 262 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 TYRP14679 529 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 EIF4A3P38919 411 aaKnown RBP8.16□□□□□ -1.1
SSR1-210ENST00000489567 SULT1E1P49888 294 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 ATP11AP98196 1134 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 GAD2Q05329 585 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 C15orf59Q2T9L4 293 aaPredicted RBP8.16□□□□□ -1.1
SSR1-210ENST00000489567 ASTE1Q2TB18 679 aaPredicted RBP8.16□□□□□ -1.1
SSR1-210ENST00000489567 SLC25A52Q3SY17 297 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 CCDC14Q49A88 953 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 ADGRF1Q5T601 910 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 NUGGCQ68CJ6 796 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 PKN3Q6P5Z2 889 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 ARCQ7LC44 396 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 UNC45BQ8IWX7 931 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 CPXM2Q8N436 756 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 TC2NQ8N9U0 490 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 RXFP2Q8WXD0 754 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 CD101Q93033 1021 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 MSANTD3Q96H12 275 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 PRICKLE1Q96MT3 831 aaPredicted RBP8.16□□□□□ -1.1
SSR1-210ENST00000489567 NELL2Q99435 816 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.16□□□□□ -1.1
SSR1-210ENST00000489567 OSBPL6Q9BZF3 934 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 TRIM7Q9C029 511 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 ISCUQ9H1K1 167 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 LMAN1LQ9HAT1 526 aa8.16□□□□□ -1.1
SSR1-210ENST00000489567 C2orf42Q9NWW7 574 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms