RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 MAN2B1O00754 1011 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 NRDCO43847 1150 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 ACSL4O60488 711 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 GJB6O95452 261 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 TMEM253P0C7T8 217 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 ARSAP15289 507 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 CXCR3P49682 368 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 RPL7AP62424 266 aaKnown RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 ATP11AP98196 1134 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 GAD2Q05329 585 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 DHCR24Q15392 516 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 ZC3H12AQ5D1E8 599 aaKnown RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 OTUD1Q5VV17 481 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 TRNP1Q6NT89 227 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 TRIM67Q6ZTA4 783 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 DNAAF5Q86Y56 855 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 CCDC112Q8NEF3 446 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 CENPIQ92674 756 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 EIF3CQ99613 913 aaKnown RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 SPHK2Q9NRA0 654 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 HEBP1Q9NRV9 189 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 PIGVQ9NUD9 493 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 MARK1Q9P0L2 795 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 COX16Q9P0S2 106 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 UVRAGQ9P2Y5 699 aa16.58■□□□□ 0.24
HDAC7-224ENST00000488927 EPN1Q9Y6I3 576 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 KIF26AQ9ULI4 1882 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-224ENST00000488927 SCAMP3O14828 347 aaKnown RBP16.57■□□□□ 0.24
HDAC7-224ENST00000488927 NDUFA10O95299 355 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 CYBBP04839 570 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 CYP17A1P05093 508 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 ADH5P11766 374 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 ACAP1Q15027 740 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 ARL13BQ3SXY8 428 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 RHBDF2Q6PJF5 856 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 ZNF852Q6ZMS4 543 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 SIX5Q8N196 739 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 FAM172AQ8WUF8 416 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 NUP85Q9BW27 656 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 ARHGEF38Q9NXL2 777 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 CA14Q9ULX7 337 aa16.57■□□□□ 0.24
HDAC7-224ENST00000488927 MRPS17Q9Y2R5 130 aaKnown RBP16.57■□□□□ 0.24
HDAC7-224ENST00000488927 TYW5A2RUC4 315 aaKnown RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 SOWAHDA6NJG2 315 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 SPECC1L-ADORA2AF8WAN1 911 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 HOXC11O43248 304 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 MOCS2O96007 188 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 TFE3P19532 575 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 PSMA2P25787 234 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 GJA4P35212 333 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 EIF2DP41214 584 aaKnown RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 MAGEA1P43355 309 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 AIF1P55008 147 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 STARD6P59095 220 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 CDO1Q16878 200 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 C15orf59Q2T9L4 293 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 PREPLQ4J6C6 727 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-224ENST00000488927 LY6G5CQ5SRR4 150 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 TPRG1Q6ZUI0 275 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 RHOT2Q8IXI1 618 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 TXLNBQ8N3L3 684 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 NELL2Q99435 816 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 TKTL2Q9H0I9 626 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 CALCOCO1Q9P1Z2 691 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 CTTNBP2NLQ9P2B4 639 aa16.56■□□□□ 0.24
HDAC7-224ENST00000488927 OTOL1A6NHN0 477 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 MYO1FO00160 1098 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 CCP110O43303 1012 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 RNF8O76064 485 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 CTHP32929 405 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 KRT83P78385 493 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 PIGHQ14442 188 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 ANO4Q32M45 955 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 MPPE1Q53F39 396 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 MPP7Q5T2T1 576 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 TMEM25Q86YD3 366 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 TMEM139Q8IV31 216 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 SUGP1Q8IWZ8 645 aaKnown RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 ZNF557Q8N988 423 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 TTC8Q8TAM2 541 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 ZNF564Q8TBZ8 553 aaPredicted RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 ARHGEF26Q96DR7 871 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 XPO6Q96QU8 1125 aaKnown RBP16.55■□□□□ 0.24
HDAC7-224ENST00000488927 HAPLN3Q96S86 360 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 BBS2Q9BXC9 721 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 PACSIN1Q9BY11 444 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 ADAM33Q9BZ11 813 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 MFSD1Q9H3U5 465 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 IP6K2Q9UHH9 426 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
HDAC7-224ENST00000488927 KRBA1A5PL33 1030 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 F5H5T6 163 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 M0R296 226 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 PENKP01210 267 aaPredicted RBP16.54■□□□□ 0.24
HDAC7-224ENST00000488927 HDAC4P56524 1084 aa16.54■□□□□ 0.24
HDAC7-224ENST00000488927 FAM133BQ5BKY9 247 aaKnown RBP16.54■□□□□ 0.24
HDAC7-224ENST00000488927 TTC39BQ5VTQ0 682 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms