RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 NADSYN1Q6IA69 706 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 RHBDF2Q6PJF5 856 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 TPGS1Q6ZTW0 290 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 ARCQ7LC44 396 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 C12orf40Q86WS4 652 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 TMEM139Q8IV31 216 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 FAM172AQ8WUF8 416 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 RNF34Q969K3 372 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 NT5C3BQ969T7 300 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 OTUB2Q96DC9 234 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 PRICKLE1Q96MT3 831 aaPredicted RBP11.48□□□□□ -0.57
UBE4B-210ENST00000488228 FOXQ1Q9C009 403 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 TBC1D17Q9HA65 648 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 C11orf16Q9NQ32 467 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 TRPV5Q9NQA5 729 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 PARVAQ9NVD7 372 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 WNT16Q9UBV4 365 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 SCINQ9Y6U3 715 aa11.48□□□□□ -0.57
UBE4B-210ENST00000488228 MYO18AQ92614 2054 aaKnown RBP11.47□□□□□ -0.57
UBE4B-210ENST00000488228 GOLGA6L7A0A1B0GV03 622 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 ANKRD62A6NC57 917 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 DLL1O00548 723 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 ACSL4O60488 711 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 TSPAN3O60637 253 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 CYP1A2P05177 515 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 CCR1P32246 355 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 GBP1P32455 592 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 SGSHP51688 502 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 KDSRQ06136 332 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 ANO4Q32M45 955 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 PIK3R6Q5UE93 754 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 CWF19L1Q69YN2 538 aaKnown RBP11.47□□□□□ -0.57
UBE4B-210ENST00000488228 RFWD3Q6PCD5 774 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 RAD9BQ6WBX8 426 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 BNIPLQ7Z465 357 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 CHSY1Q86X52 802 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 FAM131BQ86XD5 332 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 TMEM25Q86YD3 366 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 FAM217AQ8IXS0 508 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 MYEOVQ96EZ4 313 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 NUP85Q9BW27 656 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 BBS2Q9BXC9 721 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 ANLNQ9NQW6 1124 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 SPHK2Q9NRA0 654 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 PLK2Q9NYY3 685 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 NDRG2Q9UN36 371 aaKnown RBP11.47□□□□□ -0.57
UBE4B-210ENST00000488228 ZNF510Q9Y2H8 683 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 SNX10Q9Y5X0 201 aa11.47□□□□□ -0.57
UBE4B-210ENST00000488228 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 KCNU1A8MYU2 1149 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 HOXC11O43248 304 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 PAGE1O75459 146 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 LATS1O95835 1130 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 H2AFZP0C0S5 128 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 PSMA2P25787 234 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 OPRD1P41143 372 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 SLC11A2P49281 568 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 CXCR3P49682 368 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 MRE11P49959 708 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 ZNF143P52747 638 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 HDAC4P56524 1084 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 PRKCQQ04759 706 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 MESP2Q0VG99 397 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 PPP2R5DQ14738 602 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 PON2Q15165 354 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 ADGRF1Q5T601 910 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 RAP1GAP2Q684P5 730 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 H2AFVQ71UI9 128 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 SND1Q7KZF4 910 aaKnown RBP eCLIP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 RALGPS2Q86X27 583 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 ADGRG2Q8IZP9 1017 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 CPXM2Q8N436 756 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 CCDC185Q8N715 623 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 NAT16Q8N8M0 369 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 FLCNQ8NFG4 579 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 CTNNBL1Q8WYA6 563 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 PGAP3Q96FM1 320 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 BTBD6Q96KE9 485 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 BTN2A3PQ96KV6 586 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 BAG1Q99933 345 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 CNPY3Q9BT09 278 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 MFSD1Q9H3U5 465 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 C8orf33Q9H7E9 229 aaPredicted RBP11.46□□□□□ -0.57
UBE4B-210ENST00000488228 ANAPC7Q9UJX3 599 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 STOML2Q9UJZ1 356 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 TFR2Q9UP52 801 aa11.46□□□□□ -0.57
UBE4B-210ENST00000488228 CHD5Q8TDI0 1954 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 GFRA2O00451 464 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 TRIM24O15164 1050 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 NDUFA10O95299 355 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 TMEM253P0C7T8 217 aa11.45□□□□□ -0.58
UBE4B-210ENST00000488228 SLC2A3P11169 496 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms