RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SPATA31A1	Q5TZJ5	1347 aa		4.93	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PSME4	Q14997	1843 aa		4.93	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCDC194	A0A1B0GVG4	234 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	hCG_1642624	A0A1W2PR95	340 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ANKRD62	A6NC57	917 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCDC160	A6NGH7	325 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TRIM64B	A6NI03	449 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TRAF5	O00463	557 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KLF11	O14901	512 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ADCY6	O43306	1168 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CLASP2	O75122	1294 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TPPP	O94811	219 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	BAG2	O95816	211 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CAPNS1	P04632	268 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SNRPA1	P09661	255 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	OCM2	P0CE71	109 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	OCM	P0CE72	109 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GLB1	P16278	677 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CA4	P22748	312 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TKT	P29401	623 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PML	P29590	882 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HMOX2	P30519	316 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CPOX	P36551	454 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HSPA13	P48723	471 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KRT17	Q04695	432 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IFIT5	Q13325	482 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	EPHA7	Q15375	998 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FXN	Q16595	210 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TMEM119	Q4V9L6	283 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IFIT1B	Q5T764	474 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SPOPL	Q6IQ16	392 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SDE2	Q6IQ49	451 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PGM2L1	Q6PCE3	622 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ANO5	Q75V66	913 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ANKS1B	Q7Z6G8	1248 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FRMD5	Q7Z6J6	570 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ADAT2	Q7Z6V5	191 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DZIP1	Q86YF9	867 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TICAM1	Q8IUC6	712 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	EXOC8	Q8IYI6	725 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF34	Q8IZ26	560 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PCYOX1L	Q8NBM8	494 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	DDHD1	Q8NEL9	900 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GRK7	Q8WTQ7	553 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	LARP4B	Q92615	738 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RAD54L	Q92698	747 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KRT35	Q92764	455 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CLIP3	Q96DZ5	547 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CALML4	Q96GE6	196 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CDK5RAP3	Q96JB5	506 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	LRGUK	Q96M69	825 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CFAP57	Q96MR6	1250 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RANBP9	Q96S59	729 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	UBL7	Q96S82	380 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CYTH2	Q99418	400 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PLIN2	Q99541	437 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	GPATCH1	Q9BRR8	931 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HAUS8	Q9BT25	410 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZNF341	Q9BYN7	854 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	WNT8A	Q9H1J5	351 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	KCTD10	Q9H3F6	313 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SLC52A2	Q9HAB3	445 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RRN3	Q9NYV6	651 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TAGLN3	Q9UI15	199 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HDAC9	Q9UKV0	1011 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	COG5	Q9UP83	839 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	EXOC7	Q9UPT5	735 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SORCS3	Q9UPU3	1222 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SUGT1	Q9Y2Z0	365 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SCN7A	Q01118	1682 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PAPPA	Q13219	1627 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131		A0A0G2JND7	137 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	EXOC1L	A0A1B0GW35	172 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	TRIM64C	A6NLI5	447 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RSPH10B2	B2RC85	870 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	IRS4	O14654	1257 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	AQP9	O43315	295 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	SULT1C4	O75897	302 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ESRRB	O95718	433 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RSPH10B	P0C881	870 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	RBP3	P10745	1247 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	THRA	P10827	490 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HSPA8	P11142	646 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PABPC1	P11940	636 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	STAT1	P42224	750 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ASPA	P45381	313 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	PREP	P48147	710 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	MARCKSL1	P49006	195 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	HNRNPF	P52597	415 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ITGA8	P53708	1063 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NOP14	P78316	857 aa	Known RBP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	ZBTB16	Q05516	673 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	COASY	Q13057	564 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	CCNI	Q14094	377 aa		4.92	□□□□□ -1.62
CDC42BPA-213	ENST00000488131	C16orf72	Q14CZ0	275 aa		4.92	□□□□□ -1.62

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