RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TTC39BQ5VTQ0 682 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 E4F1Q66K89 784 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 TXNDC11Q6PKC3 985 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 ZNF571Q7Z3V5 609 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 TMEM25Q86YD3 366 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 ETFBKMTQ8IXQ9 262 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 MCOLN2Q8IZK6 566 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 TMEM105Q8N8V8 129 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 NT5C3BQ969T7 300 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 ACDQ96AP0 544 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 FCRL2Q96LA5 508 aaPredicted RBP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 NPY6RQ99463 290 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.21■□□□□ 0.03
LIMS3-205ENST00000487150 DEF6Q9H4E7 631 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 PARVAQ9NVD7 372 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 TMEM59LQ9UK28 342 aa15.21■□□□□ 0.03
LIMS3-205ENST00000487150 SSU72P8A0A1W2PR75 194 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 GOLGA6L6A8MZA4 724 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 AKR1B15C9JRZ8 316 aaPredicted RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 DCNP07585 359 aaKnown RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 CHRNB1P11230 501 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 PTPN9P43378 593 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 CCR3P51677 355 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 VCPP55072 806 aaKnown RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 DEUP1Q05D60 604 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 NME3Q13232 169 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 GRAMD4Q6IC98 578 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 DCUN1D2Q6PH85 259 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 TPGS1Q6ZTW0 290 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 TRMT11Q7Z4G4 463 aaKnown RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 ZNF687Q8N1G0 1237 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 DTWD2Q8NBA8 298 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 HJURPQ8NCD3 748 aaPredicted RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 ADAM32Q8TC27 787 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 KCNV2Q8TDN2 545 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 DDI1Q8WTU0 396 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 WBP2Q969T9 261 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 NCAPGQ9BPX3 1015 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 LMAN1LQ9HAT1 526 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 MRPL47Q9HD33 250 aaKnown RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 ARHGEF4Q9NR80 690 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 DNAJC17Q9NVM6 304 aaKnown RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
LIMS3-205ENST00000487150 COL4A2P08572 1712 aa15.2■□□□□ 0.02
LIMS3-205ENST00000487150 SHISA7A6NL88 538 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 SIGLEC16A6NMB1 481 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 F5H5T6 163 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.02
LIMS3-205ENST00000487150 GALR2O43603 387 aaPredicted RBP15.19■□□□□ 0.02
LIMS3-205ENST00000487150 KAT7O95251 611 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 MOCS2O96007 188 aaPredicted RBP15.19■□□□□ 0.02
LIMS3-205ENST00000487150 PDGFRAP16234 1089 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 FLT3P36888 993 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 OPRD1P41143 372 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 GALK1P51570 392 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 EIF4EBP2Q13542 120 aaPredicted RBP15.19■□□□□ 0.02
LIMS3-205ENST00000487150 ARL13BQ3SXY8 428 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 ZC3H12AQ5D1E8 599 aaKnown RBP15.19■□□□□ 0.02
LIMS3-205ENST00000487150 RABGAP1LQ5R372 815 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 HGSNATQ68CP4 663 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 STRADAQ7RTN6 431 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 TMC6Q7Z403 805 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 SPEM1Q8N4L4 309 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 TERB1Q8NA31 727 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 TMA16Q96EY4 203 aaKnown RBP15.19■□□□□ 0.02
LIMS3-205ENST00000487150 WDCPQ9H6R7 721 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 DLGAP2Q9P1A6 1054 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 ADAMTS1Q9UHI8 967 aa15.19■□□□□ 0.02
LIMS3-205ENST00000487150 ZDBF2Q9HCK1 2354 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 LAMTOR5O43504 91 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 TULP3O75386 442 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 FTLP02792 175 aaPredicted RBP15.18■□□□□ 0.02
LIMS3-205ENST00000487150 SKILP12757 684 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 GPD1P21695 349 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 TNFRSF4P43489 277 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 DGKGP49619 791 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 CXCR3P49682 368 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 ZNF75DP51815 510 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 PTPN5P54829 565 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 OXCT1P55809 520 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 EIF4HQ15056 248 aaKnown RBP15.18■□□□□ 0.02
LIMS3-205ENST00000487150 GAB4Q2WGN9 574 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 C2CD6Q53TS8 623 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 C1orf210Q8IVY1 113 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 ZNF653Q96CK0 615 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 CHFRQ96EP1 664 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 MCEEQ96PE7 176 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 ISCUQ9H1K1 167 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 SPATA6Q9NWH7 488 aaPredicted RBP15.18■□□□□ 0.02
LIMS3-205ENST00000487150 LCMT1Q9UIC8 334 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 SLC27A6Q9Y2P4 619 aa15.18■□□□□ 0.02
LIMS3-205ENST00000487150 MTF2Q9Y483 593 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms