RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 RING1Q06587 406 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 DMC1Q14565 340 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 ZNF528Q3MIS6 628 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 MPPE1Q53F39 396 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 FAM133BQ5BKY9 247 aaKnown RBP16.87■□□□□ 0.29
DDR1-246ENST00000485023 ADGRF1Q5T601 910 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 NADSYN1Q6IA69 706 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 ZC3H14Q6PJT7 736 aaKnown RBP16.87■□□□□ 0.29
DDR1-246ENST00000485023 BEND5Q7L4P6 421 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 ZDHHC17Q8IUH5 632 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 RNF34Q969K3 372 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 ACDQ96AP0 544 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 ERLEC1Q96DZ1 483 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 SLC39A13Q96H72 371 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 MYOFQ9NZM1 2061 aa16.87■□□□□ 0.29
DDR1-246ENST00000485023 PRRT4C9JH25 899 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 LATS1O95835 1130 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 IGLV3-25P01717 112 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 TFE3P19532 575 aaPredicted RBP16.86■□□□□ 0.29
DDR1-246ENST00000485023 WASP42768 502 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 GABRB2P47870 512 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 SULT1E1P49888 294 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 NNTQ13423 1086 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 ASIC2Q16515 512 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 CLEC16AQ2KHT3 1053 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 RAP1GAP2Q684P5 730 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 TRIM72Q6ZMU5 477 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 MAMSTRQ6ZN01 415 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 TXNDC5Q8NBS9 432 aaKnown RBP16.86■□□□□ 0.29
DDR1-246ENST00000485023 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 MYEOVQ96EZ4 313 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 PRICKLE1Q96MT3 831 aaPredicted RBP16.86■□□□□ 0.29
DDR1-246ENST00000485023 AGPAT1Q99943 283 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
DDR1-246ENST00000485023 METTL5Q9NRN9 209 aaKnown RBP16.86■□□□□ 0.29
DDR1-246ENST00000485023 ZSCAN32Q9NX65 697 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 STIM2Q9P246 746 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 STOML2Q9UJZ1 356 aa16.86■□□□□ 0.29
DDR1-246ENST00000485023 M0QYT0 321 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 TBL1XO60907 577 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 GJB6O95452 261 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 CISD3P0C7P0 127 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 HOXD9P28356 352 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 GBP1P32455 592 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 NOS2P35228 1153 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 TNFRSF4P43489 277 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 NSFP46459 744 aaKnown RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 MRE11P49959 708 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 GEN1Q17RS7 908 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 PREPLQ4J6C6 727 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 OTUD1Q5VV17 481 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 EGFLAMQ63HQ2 1017 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 E4F1Q66K89 784 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 SYT13Q7L8C5 426 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 CHSY1Q86X52 802 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 EMC1Q8N766 993 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 IL17RCQ8NAC3 791 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 ZNF397Q8NF99 534 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 CCDC26Q8TAB7 109 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 NKD2Q969F2 451 aaPredicted RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 TMA16Q96EY4 203 aaKnown RBP16.85■□□□□ 0.29
DDR1-246ENST00000485023 TTYH3Q9C0H2 523 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-246ENST00000485023 CALCOCO1Q9P1Z2 691 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 PCDHGA2Q9Y5H1 932 aa16.85■□□□□ 0.29
DDR1-246ENST00000485023 SGK1O00141 431 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 PAPSS2O95340 614 aaPredicted RBP16.84■□□□□ 0.29
DDR1-246ENST00000485023 CCDC172P0C7W6 258 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 CHRM1P11229 460 aaPredicted RBP16.84■□□□□ 0.29
DDR1-246ENST00000485023 UNGP13051 313 aaPredicted RBP16.84■□□□□ 0.29
DDR1-246ENST00000485023 MMP8P22894 467 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 FLT3P36888 993 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 GGCXP38435 758 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 MATKP42679 507 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 MRPS21P82921 87 aaKnown RBP16.84■□□□□ 0.29
DDR1-246ENST00000485023 PIK3R6Q5UE93 754 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 SFMBT2Q5VUG0 894 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 NUDT18Q6ZVK8 323 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 ASCL5Q7RTU5 278 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 CPLX3Q8WVH0 158 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 ACOX2Q99424 681 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 TBCBQ99426 244 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 ADAM33Q9BZ11 813 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 XPO4Q9C0E2 1151 aaKnown RBP16.84■□□□□ 0.29
DDR1-246ENST00000485023 HCN2Q9UL51 889 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 STAP1Q9ULZ2 295 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 MMP17Q9ULZ9 603 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 CACNA1IQ9P0X4 2223 aa16.84■□□□□ 0.29
DDR1-246ENST00000485023 A0A0A0MRY4 1105 aa16.83■□□□□ 0.28
DDR1-246ENST00000485023 TMCO5BA8MYB1 307 aa16.83■□□□□ 0.28
DDR1-246ENST00000485023 GFRA2O00451 464 aa16.83■□□□□ 0.28
DDR1-246ENST00000485023 HNRNPLP14866 589 aaKnown RBP eCLIP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms