RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 SNX25Q9H3E2 840 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 FBXO44Q9H4M3 255 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 THAP9Q9H5L6 903 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ZFP14Q9HCL3 533 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 DMAP1Q9NPF5 467 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 CLIC5Q9NZA1 410 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MAGEC2Q9UBF1 373 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 MUTYHQ9UIF7 546 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 ARHGAP26Q9UNA1 814 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 TLR6Q9Y2C9 796 aa5.19□□□□□ -1.58
PTCD3-213ENST00000480102 TIMM13Q9Y5L4 95 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-213ENST00000480102 GBF1Q92538 1859 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 PIEZO1Q92508 2521 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 MYBPHLA2RUH7 354 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 TMEM221A6NGB7 291 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 A8MXQ7 604 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 M0R296 226 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 GFRA2O00451 464 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 NCAM2O15394 837 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CCL16O15467 120 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 LETM1O95202 739 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 HLA-DRAP01903 254 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 AOC1P19801 751 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 LMO2P25791 158 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 EEF1GP26641 437 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 HOXA6P31267 233 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 EIF2DP41214 584 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CCR2P41597 374 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 RPL34P49207 117 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 FMO5P49326 533 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF132P52740 706 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ETF1P62495 437 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 DLG4P78352 724 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 AMPD2Q01433 879 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 MTA1Q13330 715 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 BIRC3Q13489 604 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 SLBPQ14493 270 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CLUL1Q15846 466 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 IFI16Q16666 785 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 SLC5A9Q2M3M2 681 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF528Q3MIS6 628 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 MGAT5BQ3V5L5 792 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ARHGAP29Q52LW3 1261 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 PAQR9Q6ZVX9 377 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 FAM214BQ7L5A3 538 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 TMEM150AQ86TG1 271 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 OSTM1Q86WC4 334 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 DDX42Q86XP3 938 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 FAM114A1Q8IWE2 563 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CMTM8Q8IZV2 173 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 FUKQ8N0W3 1084 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CELF5Q8N6W0 485 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 UBR7Q8N806 425 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 AGBL5Q8NDL9 886 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 PHC3Q8NDX5 983 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 LMO3Q8TAP4 145 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ITFG1Q8TB96 612 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ENOX1Q8TC92 643 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 KCTD13Q8WZ19 329 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 FGF14Q92915 247 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CLDN23Q96B33 292 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CHAMP1Q96JM3 812 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 HEXIM2Q96MH2 286 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 SLITRK1Q96PX8 696 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 GCNAQ96QF7 691 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 MMS19Q96T76 1030 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 TRMT61BQ9BVS5 477 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 FAM126AQ9BYI3 521 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 NUP62CLQ9H1M0 184 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 SEMA4AQ9H3S1 761 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 EPHX3Q9H6B9 360 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 C8orf33Q9H7E9 229 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 APOBEC3GQ9HC16 384 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CRTAC1Q9NQ79 661 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 GCNT4Q9P109 453 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 ADGRE2Q9UHX3 823 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 GTF3C4Q9UKN8 822 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 SLC5A6Q9Y289 635 aa5.18□□□□□ -1.58
PTCD3-213ENST00000480102 MRPS17Q9Y2R5 130 aaKnown RBP5.18□□□□□ -1.58
PTCD3-213ENST00000480102 CCDC163A0A0D9SF12 145 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF840PA6NDX5 716 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 PROB1E7EW31 1015 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 RBAK-RBAKDNI3L0D1 243 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 AFPP02771 609 aaKnown RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 SPATA31D3P0C874 917 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 SETSIPP0DME0 302 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ANXA13P27216 316 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 GABRR2P28476 465 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 AVPR2P30518 371 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 GBP2P32456 591 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-213ENST00000480102 PIK3CAP42336 1068 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 GCLMP48507 274 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 SLC8A3P57103 927 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 ZNF445P59923 1031 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 CUL2Q13617 745 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 PDGFRLQ15198 375 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 CNGA2Q16280 664 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 NKG7Q16617 165 aa5.17□□□□□ -1.58
PTCD3-213ENST00000480102 PREPLQ4J6C6 727 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms