RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MAGEA9P43362 315 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 GALK1P51570 392 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 GRSF1Q12849 480 aaKnown RBP eCLIP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 MAPK8IP2Q13387 824 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 LRRC32Q14392 662 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PON2Q15165 354 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PREPLQ4J6C6 727 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 MPPE1Q53F39 396 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 ZC3H12AQ5D1E8 599 aaKnown RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 DGKKQ5KSL6 1271 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 TPGS1Q6ZTW0 290 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PHLDB2Q86SQ0 1253 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 EMC1Q8N766 993 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 ATP6V0D2Q8N8Y2 350 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 RXFP2Q8WXD0 754 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 CD101Q93033 1021 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 RNF34Q969K3 372 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 BTN2A3PQ96KV6 586 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 BBS2Q9BXC9 721 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 DEF6Q9H4E7 631 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PARVAQ9NVD7 372 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 COX16Q9P0S2 106 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 KCNU1A8MYU2 1149 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 NEDD8-MDP1E9PL57 170 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 PI15O43692 258 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 ENDOD1O94919 500 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 MOCS2O96007 188 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 TYRP14679 529 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 DESP17661 470 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 GPD1P21695 349 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CDC25BP30305 580 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 AVPR2P30518 371 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 RFC1P35251 1148 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 OPRD1P41143 372 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 PTPN9P43378 593 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 RPS9P46781 194 aaKnown RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CXCR3P49682 368 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 NUBP1P53384 320 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 DEUP1Q05D60 604 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 NME3Q13232 169 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 MAMLD1Q13495 774 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CCINQ13939 588 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 SLC18A3Q16572 532 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC14Q49A88 953 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 TMEM196Q5HYL7 178 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 BRMS1LQ5PSV4 323 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 OTUD1Q5VV17 481 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 FYB2Q5VWT5 728 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 PLEKHA7Q6IQ23 1121 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 TRNP1Q6NT89 227 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 ALKBH5Q6P6C2 394 aaKnown RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 DCUN1D2Q6PH85 259 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 STRADAQ7RTN6 431 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 BNIPLQ7Z465 357 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 SYNPOQ8N3V7 929 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CLDN23Q96B33 292 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 ZNF653Q96CK0 615 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CCDC42Q96M95 316 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CFAP57Q96MR6 1250 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 PNKPQ96T60 521 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 TBCBQ99426 244 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 WDCPQ9H6R7 721 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 MRPL47Q9HD33 250 aaKnown RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 PIGVQ9NUD9 493 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 DEC1Q9P2X7 70 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 CNOT8Q9UFF9 292 aaKnown RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-219ENST00000479941 SCINQ9Y6U3 715 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 WDFY4Q6ZS81 3184 aa11.24□□□□□ -0.61
ATG4B-219ENST00000479941 A0A0A0MRY4 1105 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 TYW5A2RUC4 315 aaKnown RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 GFRA2O00451 464 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 AKR1B10O60218 316 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 CACNG3O60359 315 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 TULP3O75386 442 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 GJB6O95452 261 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ADCY5O95622 1261 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 PENKP01210 267 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 CHRNB1P11230 501 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 TFE3P19532 575 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 RDXP35241 583 aaKnown RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ZNF143P52747 638 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 VCPP55072 806 aaKnown RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ATP11AP98196 1134 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 FZD5Q13467 585 aa11.23□□□□□ -0.61
ATG4B-219ENST00000479941 ASTE1Q2TB18 679 aaPredicted RBP11.23□□□□□ -0.61
ATG4B-219ENST00000479941 FBXO43Q4G163 708 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms