RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 FAM72CH0Y354 149 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 CAPN9O14815 690 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 FAM155BO75949 473 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 FBXO21O94952 628 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 NKX3-2P78367 333 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 FAAP100Q0VG06 881 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 PDK4Q16654 411 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 FAM72AQ5TYM5 149 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 ANKRD20A3Q5VUR7 823 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 FAM72DQ6L9T8 149 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 FAM72BQ86X60 149 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 TP53INP2Q8IXH6 220 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 BANPQ8N9N5 519 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 WDR6Q9NNW5 1121 aaKnown RBP13.44□□□□□ -0.26
SEC13-216ENST00000479868 SLCO1B3Q9NPD5 702 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 H3BRJ5 948 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 INHBAP08476 426 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 NCAM1P13591 858 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 TPSB2P20231 275 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 ADRA1DP25100 572 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 GBP2P32456 591 aaPredicted RBP13.44□□□□□ -0.26
SEC13-216ENST00000479868 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
SEC13-216ENST00000479868 BRCC3P46736 316 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 SEMA5AQ13591 1074 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 TCP10LQ8TDR4 215 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 HASPINQ8TF76 798 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 SIGLEC10Q96LC7 697 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 CEP41Q9BYV8 373 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 CNGB3Q9NQW8 809 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 SLC17A7Q9P2U7 560 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 IKBKGQ9Y6K9 419 aa13.44□□□□□ -0.26
SEC13-216ENST00000479868 A0A0A0MRY4 1105 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 HACD1B0YJ81 288 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 ZNF623O75123 536 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 B3GAT3O94766 335 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 ZWINTO95229 277 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 MGAT5Q09328 741 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 AP1B1Q10567 949 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 DPYSQ14117 519 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 LPIN1Q14693 890 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 FAM133BQ5BKY9 247 aaKnown RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 UNC5AQ6ZN44 842 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 RGS9BPQ6ZS82 235 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 RFX8Q6ZV50 586 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 BHLHA9Q7RTU4 235 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 CTAGE3PQ8IX95 158 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 CNPY4Q8N129 248 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 SMARCD1Q96GM5 515 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 RMDN2Q96LZ7 410 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 SPATA13Q96N96 652 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEC13-216ENST00000479868 ABT1Q9ULW3 272 aaKnown RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 SLC12A4Q9UP95 1085 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 ARL2BPQ9Y2Y0 163 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 A0A0U1RQF3 1178 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 IQANK1A0A1B0GTG1 560 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 EEF2KO00418 725 aaKnown RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 LTFP02788 710 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 MT-ND3P03897 115 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 ELNP15502 786 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 PCSK1P29120 753 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 ADRA1BP35368 520 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 DSC3Q14574 896 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 PRKD1Q15139 912 aaPredicted RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 CCSAPQ6IQ19 270 aaPredicted RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 CD300LGQ6UXG3 332 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 KLHDC9Q8NEP7 349 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 EDEM1Q92611 657 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 LRRC39Q96DD0 335 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 P2RY11Q96G91 374 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 ADAM2Q99965 735 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 TRMT13Q9NUP7 481 aaKnown RBP13.43□□□□□ -0.26
SEC13-216ENST00000479868 PHTF1Q9UMS5 762 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 INPP5FQ9Y2H2 1132 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 MAD1L1Q9Y6D9 718 aa13.43□□□□□ -0.26
SEC13-216ENST00000479868 C9IYK1 514 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 RNF103O00237 685 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 DCLK1O15075 740 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 UBOX5O94941 541 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 APOEP02649 317 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 ODC1P11926 461 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 PRKCHP24723 683 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 TRMT10BQ6PF06 316 aaKnown RBP13.42□□□□□ -0.26
SEC13-216ENST00000479868 SH2D5Q6ZV89 423 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 LRRC6Q86X45 466 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 CCDC63Q8NA47 563 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 COLGALT1Q8NBJ5 622 aa13.42□□□□□ -0.26
SEC13-216ENST00000479868 CCNYQ8ND76 341 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms