RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PJA2O43164 708 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 MTA2O94776 668 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 MOCS2O96007 188 aaPredicted RBP15.93■□□□□ 0.14
SEC13-215ENST00000477547 F9P00740 461 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 ATXN1P54253 815 aaKnown RBP15.93■□□□□ 0.14
SEC13-215ENST00000477547 FOXK2Q01167 660 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 KIF5AQ12840 1032 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 GRM2Q14416 872 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 SH3PXD2AQ5TCZ1 1133 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 BNIPLQ7Z465 357 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 DEPDC1BQ8WUY9 529 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 RNF34Q969K3 372 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 WBP2Q969T9 261 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 LACRTQ9GZZ8 138 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 IP6K2Q9UHH9 426 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 PAXBP1Q9Y5B6 917 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 PTPRZ1P23471 2315 aaPredicted RBP15.92■□□□□ 0.14
SEC13-215ENST00000477547 MYO15AQ9UKN7 3530 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 A0A0U1RQJ8 604 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 E2F8A0AVK6 867 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 H0Y858 1186 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 MYO1FO00160 1098 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 AVPR2P30518 371 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 CCR1P32246 355 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 NOP2P46087 812 aaKnown RBP15.92■□□□□ 0.14
SEC13-215ENST00000477547 HARS2P49590 506 aaKnown RBP15.92■□□□□ 0.14
SEC13-215ENST00000477547 HDAC4P56524 1084 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 TCEAL1Q15170 157 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 RAB6CQ53S08 254 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 ZC3H12AQ5D1E8 599 aaKnown RBP15.92■□□□□ 0.14
SEC13-215ENST00000477547 CC2D1AQ6P1N0 951 aaPredicted RBP15.92■□□□□ 0.14
SEC13-215ENST00000477547 FAM131BQ86XD5 332 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 YAF2Q8IY57 180 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 NIPA2Q8N8Q9 360 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 ATRIPQ8WXE1 791 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 RSAD2Q8WXG1 361 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 CENPIQ92674 756 aaPredicted RBP15.92■□□□□ 0.14
SEC13-215ENST00000477547 SLC39A13Q96H72 371 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 TSGA10Q9BZW7 698 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 DCLK3Q9C098 648 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 RAB6CQ9H0N0 254 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 IGSF9Q9P2J2 1179 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 TRIM10Q9UDY6 481 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 LIMD1Q9UGP4 676 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 LCMT1Q9UIC8 334 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 WNT6Q9Y6F9 365 aa15.92■□□□□ 0.14
SEC13-215ENST00000477547 MACROD2A1Z1Q3 448 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 BTNL10A8MVZ5 291 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 RNF8O76064 485 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 PROSCO94903 275 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 ASGR2P07307 311 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 SLC2A3P11169 496 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 PSMC3P17980 439 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 IFNAR2P48551 515 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 CXCR3P49682 368 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 HADHBP55084 474 aaKnown RBP15.91■□□□□ 0.14
SEC13-215ENST00000477547 EIF4EBP2Q13542 120 aaPredicted RBP15.91■□□□□ 0.14
SEC13-215ENST00000477547 PIGHQ14442 188 aaPredicted RBP15.91■□□□□ 0.14
SEC13-215ENST00000477547 MESDQ14696 234 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 PPP2R5DQ14738 602 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 BRMS1LQ5PSV4 323 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 DAB2IPQ5VWQ8 1189 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 Q6ZNB5 142 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 ASCL5Q7RTU5 278 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 DENND1CQ8IV53 801 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 MFSD6LQ8IWD5 586 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 UNC45BQ8IWX7 931 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 BBS7Q8IWZ6 715 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 ASIC4Q96FT7 647 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 LRRC3BQ96PB8 259 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 RPP25Q9BUL9 199 aaKnown RBP15.91■□□□□ 0.14
SEC13-215ENST00000477547 PLA2G2FQ9BZM2 168 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 KCNK12Q9HB15 430 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.91■□□□□ 0.147e-6■□□□□ 8.9
SEC13-215ENST00000477547 PPP2R2CQ9Y2T4 447 aa15.91■□□□□ 0.14
SEC13-215ENST00000477547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
SEC13-215ENST00000477547 BUB1O43683 1085 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 KRT86O43790 486 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 GREM1O60565 184 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 LRCH4O75427 683 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 ENDOD1O94919 500 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 KLKB1P03952 638 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 MAN1A1P33908 653 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 SLC11A2P49281 568 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 NAP1L1P55209 391 aaKnown RBP15.9■□□□□ 0.14
SEC13-215ENST00000477547 SIGLEC14Q08ET2 396 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 FCHO2Q0JRZ9 810 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 ARHGAP29Q52LW3 1261 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 SCYL2Q6P3W7 929 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 ATP6V0D2Q8N8Y2 350 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 NXPE3Q969Y0 559 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 ZFYVE19Q96K21 471 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 TMEM51Q9NW97 253 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 THG1LQ9NWX6 298 aaKnown RBP15.9■□□□□ 0.14
SEC13-215ENST00000477547 SALL4Q9UJQ4 1053 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 PYCARDQ9ULZ3 195 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 DUSP10Q9Y6W6 482 aa15.9■□□□□ 0.14
SEC13-215ENST00000477547 SLC9A3R1O14745 358 aaPredicted RBP15.89■□□□□ 0.13
SEC13-215ENST00000477547 BUB1BO60566 1050 aaPredicted RBP15.89■□□□□ 0.13
SEC13-215ENST00000477547 LATS1O95835 1130 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms