RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ZNF77Q15935 545 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 ARL13BQ3SXY8 428 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 NT5DC3Q86UY8 548 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 ZSCAN30Q86W11 494 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 ATP6V0D2Q8N8Y2 350 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 TDRD5Q8NAT2 981 aaKnown RBP16.8■□□□□ 0.28
VHL-203ENST00000477538 NTAN1Q96AB6 310 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 PHF7Q9BWX1 381 aaPredicted RBP16.8■□□□□ 0.28
VHL-203ENST00000477538 DCLK3Q9C098 648 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 ZWILCHQ9H900 591 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 TRPV4Q9HBA0 871 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 ZFP14Q9HCL3 533 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 EPS15L1Q9UBC2 864 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 SLC12A6Q9UHW9 1150 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
VHL-203ENST00000477538 AMFRQ9UKV5 643 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 FAM50BQ9Y247 325 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 EYSQ5T1H1 3165 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 CHD5Q8TDI0 1954 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 TNNT1P13805 278 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 FCARP24071 287 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 IL1R2P27930 398 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 ADRA1BP35368 520 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 VIPR2P41587 438 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 AIF1P55008 147 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 ZNF569Q5MCW4 686 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 CYP4V2Q6ZWL3 525 aaPredicted RBP16.79■□□□□ 0.28
VHL-203ENST00000477538 DENND1CQ8IV53 801 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 BTN2A3PQ96KV6 586 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 SNRNP25Q9BV90 132 aaKnown RBP16.79■□□□□ 0.28
VHL-203ENST00000477538 ANLNQ9NQW6 1124 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 TMPRSS4Q9NRS4 437 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 OBP2AQ9NY56 170 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 THEGQ9P2T0 379 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 FZD10Q9ULW2 581 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 AP4E1Q9UPM8 1137 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 NR2E1Q9Y466 385 aa16.79■□□□□ 0.28
VHL-203ENST00000477538 SHROOM3Q8TF72 1996 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 E2F8A0AVK6 867 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 I6L893 689 aaPredicted RBP16.78■□□□□ 0.28
VHL-203ENST00000477538 SCAMP3O14828 347 aaKnown RBP16.78■□□□□ 0.28
VHL-203ENST00000477538 PSTPIP1O43586 416 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 GREM1O60565 184 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 PAGE1O75459 146 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 LATS1O95835 1130 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 KLKB1P03952 638 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
VHL-203ENST00000477538 SLC11A2P49281 568 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 SCAPQ12770 1279 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 MTA1Q13330 715 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 SMTNL2Q2TAL5 461 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 EFHC2Q5JST6 749 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 ERMARDQ5T6L9 678 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 LRRC38Q5VT99 294 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 TXNRD3NBQ6F5E7 133 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 Q6ZNB5 142 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 HTR3DQ70Z44 454 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 MTSS1LQ765P7 747 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 POLNQ7Z5Q5 900 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 RHOT1Q8IXI2 618 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 SLC35F6Q8N357 371 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 RIN3Q8TB24 985 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 TEKT4Q8WW24 435 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 CD101Q93033 1021 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 E2F7Q96AV8 911 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 RSPRY1Q96DX4 576 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 GPATCH2LQ9NWQ4 482 aa16.78■□□□□ 0.28
VHL-203ENST00000477538 XPO7Q9UIA9 1087 aaKnown RBP16.78■□□□□ 0.28
VHL-203ENST00000477538 PACSIN2Q9UNF0 486 aaPredicted RBP16.78■□□□□ 0.28
VHL-203ENST00000477538 PRUNE2Q8WUY3 3088 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 C2CD4DB7Z1M9 353 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 ACSL4O60488 711 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 KRT7P08729 469 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 RARAP10276 462 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 IL9P15248 144 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.28
VHL-203ENST00000477538 GNG11P61952 73 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 AAK1Q2M2I8 961 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 BOLA3Q53S33 107 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 KCNT1Q5JUK3 1230 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 PARM1Q6UWI2 310 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 PSTKQ8IV42 348 aaKnown RBP16.77■□□□□ 0.28
VHL-203ENST00000477538 ST13P5Q8NFI4 369 aaPredicted RBP16.77■□□□□ 0.28
VHL-203ENST00000477538 BPIFB1Q8TDL5 484 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 HSPH1Q92598 858 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 AZIN2Q96A70 460 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 ELSPBP1Q96BH3 223 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 RPGRIP1Q96KN7 1286 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 HAPLN3Q96S86 360 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 KXD1Q9BQD3 176 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 AGO1Q9UL18 857 aaKnown RBP16.77■□□□□ 0.28
VHL-203ENST00000477538 ZNF510Q9Y2H8 683 aa16.77■□□□□ 0.28
VHL-203ENST00000477538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.77■□□□□ 0.28
VHL-203ENST00000477538 KIAA1549LQ6ZVL6 1849 aa16.77■□□□□ 0.27
VHL-203ENST00000477538 CCDC66A2RUB6 948 aa16.76■□□□□ 0.27
VHL-203ENST00000477538 MIF4GDA9UHW6 222 aaKnown RBP16.76■□□□□ 0.27
VHL-203ENST00000477538 CTNNA2P26232 953 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms