RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TOP3BO95985 862 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 IGLV3-27P01718 113 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 CKMP06732 381 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GLI1P08151 1106 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 MBL2P11226 248 aaPredicted RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 RFC1P35251 1148 aaPredicted RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ATP5C1P36542 298 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 AVPR1AP37288 418 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 NSFP46459 744 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GALCP54803 685 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GPC5P78333 572 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF252P-AS1Q0IIN9 211 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 EFEMP1Q12805 493 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 MAMLD1Q13495 774 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GRM2Q14416 872 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GSE1Q14687 1217 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 CCDC6Q16204 474 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 SLC18A3Q16572 532 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GAB4Q2WGN9 574 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 EFHC1Q5JVL4 640 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 FAM102AQ5T9C2 384 aaPredicted RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 SH3PXD2AQ5TCZ1 1133 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 BTBD8Q5XKL5 378 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ALKBH5Q6P6C2 394 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 Q6ZNB5 142 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ARCQ7LC44 396 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 MIB1Q86YT6 1006 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ZDHHC17Q8IUH5 632 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 MFSD6LQ8IWD5 586 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ARHGAP18Q8N392 663 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ARFGAP1Q8N6T3 406 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 CELF5Q8N6W0 485 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 C3orf20Q8ND61 904 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 IPO4Q8TEX9 1081 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 FAM149B1Q96BN6 582 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ARHGEF26Q96DR7 871 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 SLC39A13Q96H72 371 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 VCPIP1Q96JH7 1222 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 PDLIM2Q96JY6 352 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ZFYVE19Q96K21 471 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 BBC3Q96PG8 261 aaPredicted RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 GCNAQ96QF7 691 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 NPY6RQ99463 290 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 FAM83CQ9BQN1 747 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 DDX23Q9BUQ8 820 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 POPDC2Q9HBU9 364 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ZFP14Q9HCL3 533 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 HPS4Q9NQG7 708 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ANLNQ9NQW6 1124 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ABCC13Q9NSE7 274 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ZSCAN32Q9NX65 697 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 OBP2AQ9NY56 170 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 CFAP97Q9P2B7 532 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 IGSF9Q9P2J2 1179 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 IMPACTQ9P2X3 320 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ZMYM5Q9UJ78 669 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 DNMT3LQ9UJW3 386 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 FBXO4Q9UKT5 387 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 TFR2Q9UP52 801 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 NBEAQ8NFP9 2946 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 A0A0U1RQJ8 604 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 SLC12A8A0AV02 714 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TMEM8BA6NDV4 472 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 SIGLEC16A6NMB1 481 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 GFRA2O00451 464 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 SART1O43290 800 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 KCNK5O95279 499 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 LCA5LO95447 670 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TRUB2O95900 331 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CYP1A2P05177 515 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CALB1P05937 261 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 RALAP11233 206 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 NCAM1P13591 858 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 ARSAP15289 507 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 PSMC3P17980 439 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 MATKP42679 507 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 RNASE9P60153 205 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TNK2Q07912 1038 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 FOXC1Q12948 553 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TRIP4Q15650 581 aaPredicted RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 EML3Q32P44 896 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CCDC14Q49A88 953 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 DCAF6Q58WW2 860 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CCDC122Q5T0U0 273 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TRIM68Q6AZZ1 485 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 NADSYN1Q6IA69 706 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TOGARAM2Q6ZUX3 1019 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CPNE8Q86YQ8 564 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 BBS7Q8IWZ6 715 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 PJA1Q8NG27 643 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 RXFP2Q8WXD0 754 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 ZCCHC14Q8WYQ9 949 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CENPIQ92674 756 aaPredicted RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 MYEOVQ96EZ4 313 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 FCRL2Q96LA5 508 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms