RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 AIM2O14862 343 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 KRT3P12035 628 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 ALDH3B2P48448 385 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 SERPINB9P50453 376 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 STXBP5Q5T5C0 1151 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 ELMSAN1Q6PJG2 1045 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 CHERPQ8IWX8 916 aaKnown RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 EMC1Q8N766 993 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 GSDMBQ8TAX9 411 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 OXCT2Q9BYC2 517 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 FRMD8Q9BZ67 464 aaPredicted RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 FBXO28Q9NVF7 368 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 PRPF19Q9UMS4 504 aaKnown RBP19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 RNF11Q9Y3C5 154 aa19.16■□□□□ 0.66
ECHDC1-214ENST00000474289 CAPNS1P04632 268 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 IDO1P14902 403 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 MLH1P40692 756 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 LIG4P49917 911 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 GSTM4Q03013 218 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 MTMR1Q13613 665 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 FSCBQ5H9T9 825 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 LDHDQ86WU2 507 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 CMASQ8NFW8 434 aaPredicted RBP19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 OR5B17Q8NGF7 314 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 GIPC3Q8TF64 312 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 DEPDC1BQ8WUY9 529 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 SERPINI1Q99574 410 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 OSBPL6Q9BZF3 934 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 PAK5Q9P286 719 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 H7C0C1 242 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 XPO1O14980 1071 aaKnown RBP19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 ALDOAP04075 364 aaKnown RBP19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 ATP5OP48047 213 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 MRPS9P82933 396 aaKnown RBP19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF423Q2M1K9 1284 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 MPP5Q8N3R9 675 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 BHLHE22Q8NFJ8 381 aaPredicted RBP19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 GRIN3AQ8TCU5 1115 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 RANBP9Q96S59 729 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 SERPINA10Q9UK55 444 aa19.15■□□□□ 0.66
ECHDC1-214ENST00000474289 PRSS51A0A1B0GVH4 220 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 KCNN4O15554 427 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 OATP04181 439 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 GRK2P25098 689 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 HSPA1LP34931 641 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 OXCT1P55809 520 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 MS4A2Q01362 244 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 PFKPQ01813 784 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 PDAP1Q13442 181 aaKnown RBP19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 PDE1CQ14123 709 aaPredicted RBP19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 ANKDD1AQ495B1 522 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 PTPN20Q4JDL3 420 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 ZBTB41Q5SVQ8 909 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 CDRT15Q96T59 188 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 ZNF518BQ9C0D4 1074 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 KLC2Q9H0B6 622 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 COG4Q9H9E3 785 aa19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 AGO2Q9UKV8 859 aaKnown RBP19.14■□□□□ 0.66
ECHDC1-214ENST00000474289 WDR64B1ANS9 1081 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 GLRA3O75311 464 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 CCNE2O96020 404 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 MIPP30301 263 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 SERPINB5P36952 375 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 CCR3P51677 355 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 ATXN3P54252 364 aaPredicted RBP19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 ABCE1P61221 599 aaKnown RBP19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 SLC9B1Q4ZJI4 515 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 PIGGQ5H8A4 983 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 PPP6R3Q5H9R7 873 aaPredicted RBP19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 NIPA1Q7RTP0 329 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 DSELQ8IZU8 1212 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 TFAP2BQ92481 460 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 HAPLN2Q9GZV7 340 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 RSAD1Q9HA92 442 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 SLC17A6Q9P2U8 582 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 UBIAD1Q9Y5Z9 338 aa19.14■□□□□ 0.65
ECHDC1-214ENST00000474289 TPP1O14773 563 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 CBFA2T3O75081 653 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PRKCGP05129 697 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 TFPTP0C1Z6 253 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PTPN1P18031 435 aaKnown RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 NELFEP18615 380 aaKnown RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 CDH5P33151 784 aaPredicted RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PHKA2P46019 1235 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PPP2R5DQ14738 602 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 NRF1Q16656 503 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PPM1LQ5SGD2 360 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 BNC2Q6ZN30 1099 aaPredicted RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 LZTR1Q8N653 840 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 EPS15L1Q9UBC2 864 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 TRIM43BA6NCK2 446 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 ADCY6O43306 1168 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 H6PDO95479 791 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 ZNF26P17031 533 aaPredicted RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 EPHA3P29320 983 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 HARS2P49590 506 aaKnown RBP19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 HSD17B4P51659 736 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 PKNOX1P55347 436 aa19.13■□□□□ 0.65
ECHDC1-214ENST00000474289 SLC10A2Q12908 348 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms