RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 KCTD19Q17RG1 926 aaPredicted RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 EFHC2Q5JST6 749 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 C8orf74Q6P047 294 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 MSANTD2Q6P1R3 559 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 CCDC149Q6ZUS6 474 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 PSTKQ8IV42 348 aaKnown RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 PDZD8Q8NEN9 1154 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 CCDC26Q8TAB7 109 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 FAM71BQ8TC56 605 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 ATG4AQ8WYN0 398 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 OVCA2Q8WZ82 227 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 NTAN1Q96AB6 310 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 SERPINB11Q96P15 392 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 PARD6BQ9BYG5 372 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 DCLK3Q9C098 648 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 CCSER2Q9H7U1 834 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 ANKZF1Q9H8Y5 726 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 ZNF334Q9HCZ1 680 aaPredicted RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 OLA1Q9NTK5 396 aaKnown RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 CWC15Q9P013 229 aaKnown RBP11.14□□□□□ -0.63
SP140-208ENST00000473711 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 RASAL2Q9UJF2 1139 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 EFR3BQ9Y2G0 817 aa11.14□□□□□ -0.63
SP140-208ENST00000473711 SLC12A8A0AV02 714 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 FAM72CH0Y354 149 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 H3BRJ5 948 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 I6L893 689 aaPredicted RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 PER2O15055 1255 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 CREB3O43889 395 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 TLR5O60602 858 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 ZMYND10O75800 440 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 HMBSP08397 361 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 GOT1P17174 413 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 AMPD1P23109 780 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 CHRNA3P32297 505 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 ARL4AP40617 200 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 CLCN4P51793 760 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 AIF1P55008 147 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 TFDP2Q14188 446 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 RAB30Q15771 203 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 CCNG2Q16589 344 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 BRMS1LQ5PSV4 323 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 PPM1LQ5SGD2 360 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 HECTD3Q5T447 861 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 FAM72AQ5TYM5 149 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 PDE12Q6L8Q7 609 aaKnown RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 FAM72DQ6L9T8 149 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 TTC27Q6P3X3 843 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 C1orf228Q6PIY5 440 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 CCDC137Q6PK04 289 aaKnown RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 BBS12Q6ZW61 710 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 ITIH5Q86UX2 942 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 FAM72BQ86X60 149 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 PQLC3Q8N755 202 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 PCDH19Q8TAB3 1148 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 ARNTL2Q8WYA1 636 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 PSMG2Q969U7 264 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 TRMT2BQ96GJ1 504 aaKnown RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 SIK2Q9H0K1 926 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 SLITRK6Q9H5Y7 841 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 LRRC19Q9H756 370 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 HOMER3Q9NSC5 361 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 ARHGEF38Q9NXL2 777 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 SAE1Q9UBE0 346 aaPredicted RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 DMGDHQ9UI17 866 aaKnown RBP11.13□□□□□ -0.63
SP140-208ENST00000473711 ASB3Q9Y575 518 aa11.13□□□□□ -0.63
SP140-208ENST00000473711 EEF2KO00418 725 aaKnown RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 DYNC1I1O14576 645 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 APOL1O14791 398 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 CCL16O15467 120 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 TTI1O43156 1089 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 DAPK3O43293 454 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 PAGE1O75459 146 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 MOCS2O96007 188 aaPredicted RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 F11P03951 625 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 EPCAMP16422 314 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 CCR1P32246 355 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 ATP5C1P36542 298 aaKnown RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 PTGIRP43119 386 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 SCAPQ12770 1279 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 PPP2R5DQ14738 602 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 TRIP4Q15650 581 aaPredicted RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 SNX30Q5VWJ9 437 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 MAATS1Q7Z4T9 603 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 RBM23Q86U06 439 aaKnown RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 ELMOD1Q8N336 334 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 C12orf50Q8NA57 414 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms