RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	CENPU	Q71F23	418 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	DDX53	Q86TM3	631 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	LRRC49	Q8IUZ0	686 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	C7orf61	Q8IZ16	206 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	SLC39A11	Q8N1S5	342 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	LZTR1	Q8N653	840 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	TSEN2	Q8NCE0	465 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	FBXO22	Q8NEZ5	403 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	DQX1	Q8TE96	717 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	TFB1M	Q8WVM0	346 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	NDRG1	Q92597	394 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	ZIM3	Q96PE6	472 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	TMEM109	Q9BVC6	243 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	HERC2P3	Q9BVR0	1158 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	RHOBTB2	Q9BYZ6	727 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	UBE2O	Q9C0C9	1292 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	KLC2	Q9H0B6	622 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	RETREG1	Q9H6L5	497 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	GPATCH2L	Q9NWQ4	482 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	ARHGEF38	Q9NXL2	777 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	AFF4	Q9UHB7	1163 aa	Known RBP	11.37	□□□□□ -0.59
SND1-208	ENST00000470463	TLR6	Q9Y2C9	796 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	PCDHB12	Q9Y5F1	795 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	HEY1	Q9Y5J3	304 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	NLRC5	Q86WI3	1866 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	LTBP2	Q14767	1821 aa		11.37	□□□□□ -0.59
SND1-208	ENST00000470463	C5orf60	A6NFR6	353 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CHAD	O15335	359 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	FGF10	O15520	208 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	GCAT	O75600	419 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	UROD	P06132	367 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	IVL	P07476	585 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	OR4Q2	P0C623	313 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CSH1	P0DML2	217 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CSH2	P0DML3	217 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CSF2RA	P15509	400 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	PECAM1	P16284	738 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	TSHR	P16473	764 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	GOT1	P17174	413 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	ATP5D	P30049	168 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	GLUD2	P49448	558 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CDR1	P51861	262 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	ARL4C	P56559	192 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	COG7	P83436	770 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CDK16	Q00536	496 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	GABPB1	Q06547	395 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CBLB	Q13191	982 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	DPYS	Q14117	519 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	TRIP13	Q15645	432 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	MGAT5B	Q3V5L5	792 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	RAB6C	Q53S08	254 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	RTP2	Q5QGT7	225 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	NCBP2-AS2	Q69YL0	99 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	C1orf228	Q6PIY5	440 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	TAC4	Q86UU9	113 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	ZC3H18	Q86VM9	953 aa	Known RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	SCAMP5	Q8TAC9	235 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	ZNF461	Q8TAF7	563 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	RIN2	Q8WYP3	895 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	EDEM1	Q92611	657 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	FBXO32	Q969P5	355 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	C1orf74	Q96LT6	269 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	YME1L1	Q96TA2	773 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	TTLL2	Q9BWV7	592 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	TKTL2	Q9H0I9	626 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	RAB6C	Q9H0N0	254 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CATSPERB	Q9H7T0	1116 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	RC3H2	Q9HBD1	1191 aa	Known RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	ARHGEF4	Q9NR80	690 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	OR12D3	Q9UGF7	316 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CDY1	Q9Y6F8	540 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	SCN5A	Q14524	2016 aa		11.36	□□□□□ -0.59
SND1-208	ENST00000470463	CLUH	O75153	1309 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	TET1	Q8NFU7	2136 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	TRIM43B	A6NCK2	446 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	GOLGA6C	A6NDK9	693 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	NT5C1B-RDH14	C9J2C7	533 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	AGPS	O00116	658 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	KCNN4	O15554	427 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	CREB3	O43889	395 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	RNF40	O75150	1001 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	TTC4	O95801	387 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	SYF2	O95926	243 aa	Known RBP	11.35	□□□□□ -0.59
SND1-208	ENST00000470463	APOE	P02649	317 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	FGB	P02675	491 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	ABHD2	P08910	425 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	GOLGA6D	P0CG33	693 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	ATP2A2	P16615	1042 aa	Known RBP	11.35	□□□□□ -0.59
SND1-208	ENST00000470463	FDFT1	P37268	417 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	VPS41	P49754	854 aa		11.35	□□□□□ -0.59
SND1-208	ENST00000470463	ATXN1	P54253	815 aa	Known RBP	11.35	□□□□□ -0.59
SND1-208	ENST00000470463	ARPP19	P56211	112 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms