RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 PRKCHP24723 683 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 STX2P32856 288 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 MAGEA11P43364 429 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 SLCO1A2P46721 670 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 CCT5P48643 541 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 NDUFV1P49821 464 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 ATXN1P54253 815 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 BASP1P80723 227 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 GBE1Q04446 702 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 YWHAHQ04917 246 aaPredicted RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 MTA1Q13330 715 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 FRG1Q14331 258 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 MBTPS1Q14703 1052 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 FASTKD3Q14CZ7 662 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PARP6Q2NL67 630 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 MSS51Q4VC12 460 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 NOMO2Q5JPE7 1267 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 GKAP1Q5VSY0 366 aaPredicted RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 SYPL2Q5VXT5 272 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 HEATR6Q6AI08 1181 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 RFX8Q6ZV50 586 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PIGWQ7Z7B1 504 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 SRLQ86TD4 932 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 TAX1BP1Q86VP1 789 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 CAND1Q86VP6 1230 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 FAM131BQ86XD5 332 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 LRRC49Q8IUZ0 686 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 KLHDC8BQ8IXV7 354 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 COLGALT2Q8IYK4 626 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 DCP1BQ8IZD4 617 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 CYP4X1Q8N118 509 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 FBXO36Q8NEA4 188 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 CD99L2Q8TCZ2 262 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 DENND1AQ8TEH3 1009 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 CKAP2Q8WWK9 683 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 GRAMD1AQ96CP6 724 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 C8orf48Q96LL4 319 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 SPATA13Q96N96 652 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 HAPLN3Q96S86 360 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 KCNK16Q96T55 309 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 VAT1Q99536 393 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PLCD4Q9BRC7 762 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PAAF1Q9BRP4 392 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 WDR83Q9BRX9 315 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 OSBPL7Q9BZF2 842 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 ZCWPW1Q9H0M4 648 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 VPS37BQ9H9H4 285 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 ETNK1Q9HBU6 452 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PPANQ9NQ55 473 aaKnown RBP7.87□□□□□ -1.15
COL6A3-208ENST00000468792 STARD7Q9NQZ5 370 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 ABCC13Q9NSE7 274 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PIGVQ9NUD9 493 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 IL37Q9NZH6 218 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 IGSF9Q9P2J2 1179 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 HEY1Q9Y5J3 304 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PTPRDP23468 1912 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 FRMPD3Q5JV73 1810 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 PATJQ8NI35 1801 aa7.87□□□□□ -1.15
COL6A3-208ENST00000468792 FAM92AA1XBS5 289 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 OR6C75A6NL08 312 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 SMIM23A6NLE4 172 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 RASA4BC9J798 803 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 AP3B1O00203 1094 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 EEF2KO00418 725 aaKnown RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 DNM1LO00429 736 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 HOXA2O43364 376 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 RASA4O43374 803 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 TYROBPO43914 113 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 FKTNO75072 461 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 C1QAP02745 245 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 INHAP05111 366 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 USP17L7P0C7H9 530 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 NCAM1P13591 858 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 AMPD1P23109 780 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 DNAJB2P25686 324 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 HOXC13P31276 330 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 SERPINB6P35237 376 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 APLP1P51693 650 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 SEC24CP53992 1094 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 CACNA2D1P54289 1103 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 CORO7P57737 925 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 PPIDQ08752 370 aaKnown RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 NAB1Q13506 487 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 ITIH4Q14624 930 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 PPP2R5DQ14738 602 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 PLEKHG4Q58EX7 1191 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 ANKRD20A2Q5SQ80 823 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 ANKRD20A1Q5TYW2 823 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 ANKRD20A3Q5VUR7 823 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 BSPRYQ5W0U4 402 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 TTC19Q6DKK2 380 aaPredicted RBP7.86□□□□□ -1.15
COL6A3-208ENST00000468792 LRRC8BQ6P9F7 803 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 HFE2Q6ZVN8 426 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 CCDC13Q8IYE1 715 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 CRIPAKQ8N1N5 446 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 ARHGAP18Q8N392 663 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 LZTR1Q8N653 840 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 OR10T2Q8NGX3 314 aa7.86□□□□□ -1.15
COL6A3-208ENST00000468792 UHMK1Q8TAS1 419 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms