RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TK2O00142 265 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 SPTLC2O15270 562 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 STX6O43752 255 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 SYNCRIPO60506 623 aaKnown RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 IGHV4-34P06331 123 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 P4HA1P13674 534 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 HOXD9P28356 352 aaPredicted RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 HLA-FP30511 346 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 GRK6P43250 576 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 ZBTB16Q05516 673 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 STK4Q13043 487 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 CUL4BQ13620 913 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 SUZ12Q15022 739 aaKnown RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 TRIP4Q15650 581 aaPredicted RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 PM20D1Q6GTS8 502 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 TADA2BQ86TJ2 420 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 ADIPOR2Q86V24 386 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 COL26A1Q96A83 441 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 BIRC7Q96CA5 298 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 CDK5RAP1Q96SZ6 601 aaKnown RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 PRORYQ9H606 182 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 CYP3A43Q9HB55 503 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBR4-211ENST00000467272 KNTC1P50748 2209 aa12.78□□□□□ -0.36
UBR4-211ENST00000467272 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
UBR4-211ENST00000467272 NUMA1Q14980 2115 aa12.77□□□□□ -0.36
UBR4-211ENST00000467272 HLA-DRAP01903 254 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 EPHX1P07099 455 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 CD27P26842 260 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 RPS14P62263 151 aaKnown RBP12.77□□□□□ -0.37
UBR4-211ENST00000467272 E2F5Q15329 346 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 SHBQ15464 509 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 PPP1R26Q5T8A7 1209 aaPredicted RBP12.77□□□□□ -0.37
UBR4-211ENST00000467272 TMPRSS12Q86WS5 348 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 LMLNQ96KR4 655 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 UBL7Q96S82 380 aaPredicted RBP12.77□□□□□ -0.37
UBR4-211ENST00000467272 NT5C1AQ9BXI3 368 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 PRSS16Q9NQE7 514 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
UBR4-211ENST00000467272 A0A1B0GTQ1 180 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 PDXKO00764 312 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 KCNK3O14649 394 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 MAPK13O15264 365 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 ATXN7O15265 892 aaPredicted RBP12.76□□□□□ -0.37
UBR4-211ENST00000467272 CUTAO60888 179 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 YEATS4O95619 227 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 RALAP11233 206 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 HLA-EP13747 358 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 EIF2S3P41091 472 aaKnown RBP12.76□□□□□ -0.37
UBR4-211ENST00000467272 CCT8P50990 548 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 ENPEPQ07075 957 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 EFEMP1Q12805 493 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 SERPINA13PQ6UXR4 307 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 DENND1CQ8IV53 801 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 LSM14AQ8ND56 463 aaKnown RBP12.76□□□□□ -0.37
UBR4-211ENST00000467272 TSC1Q92574 1164 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 JAKMIP2Q96AA8 810 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 MYO19Q96H55 970 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 FBRSQ9HAH7 460 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 HECTD1Q9ULT8 2610 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 NAV2Q8IVL1 2488 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 MYO18BQ8IUG5 2567 aa12.76□□□□□ -0.37
UBR4-211ENST00000467272 VILLO15195 856 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
UBR4-211ENST00000467272 TLX3O43711 291 aaPredicted RBP12.75□□□□□ -0.37
UBR4-211ENST00000467272 ZIC2O95409 532 aaPredicted RBP12.75□□□□□ -0.37
UBR4-211ENST00000467272 SEMA4FO95754 770 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 NR3C1P04150 777 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 ACADMP11310 421 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 PPP3CAQ08209 521 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 STK38Q15208 465 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 NFIL3Q16649 462 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 DHRS13Q6UX07 377 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 LAYNQ6UX15 382 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 TAS1R2Q8TE23 839 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 SAP25Q8TEE9 199 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 PLD4Q96BZ4 506 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 FAXDC2Q96IV6 333 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 CIPCQ9C0C6 399 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 NIF3L1Q9GZT8 377 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 SGK2Q9HBY8 427 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 MARCH2Q9P0N8 246 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 RASAL2Q9UJF2 1139 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 TRAF3IP3Q9Y228 551 aa12.75□□□□□ -0.37
UBR4-211ENST00000467272 DFNA5O60443 496 aa12.74□□□□□ -0.37
UBR4-211ENST00000467272 PRB1P04280 392 aa12.74□□□□□ -0.37
UBR4-211ENST00000467272 WNT1P04628 370 aa12.74□□□□□ -0.37
UBR4-211ENST00000467272 HMBSP08397 361 aa12.74□□□□□ -0.37
UBR4-211ENST00000467272 C1SP09871 688 aa12.74□□□□□ -0.37
UBR4-211ENST00000467272 ITPKBP27987 946 aa12.74□□□□□ -0.37
UBR4-211ENST00000467272 YWHAGP61981 247 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms