RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 PTDSS1P48651 473 aaKnown RBP18.9■□□□□ 0.62
SYNE4-204ENST00000465425 OCRLQ01968 901 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 CCDC6Q16204 474 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 NBPF20Q3BBV1 942 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 RINLQ6ZS11 566 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.9■□□□□ 0.62
SYNE4-204ENST00000465425 COLGALT1Q8NBJ5 622 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 SMC1BQ8NDV3 1235 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 APPL2Q8NEU8 664 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 KBTBD7Q8WVZ9 684 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 HSFY1Q96LI6 401 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 LGMNQ99538 433 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 MOCS1Q9NZB8 636 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 PPARGC1AQ9UBK2 798 aaKnown RBP18.9■□□□□ 0.62
SYNE4-204ENST00000465425 MFHAS1Q9Y4C4 1052 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 SDR42E2A6NKP2 422 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 SNAI1O95863 264 aaPredicted RBP18.89■□□□□ 0.61
SYNE4-204ENST00000465425 BPGMP07738 259 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 MLNP12872 115 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 VAV1P15498 845 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 SMPD1P17405 629 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 GJA5P36382 358 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 SULT1E1P49888 294 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 AP1B1Q10567 949 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 DUSP28Q4G0W2 176 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 KHDC1Q4VXA5 237 aaKnown RBP18.89■□□□□ 0.61
SYNE4-204ENST00000465425 TEX44Q53QW1 395 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 DSTYKQ6XUX3 929 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 CYS1Q717R9 158 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 KATNBL1Q9H079 304 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 PCNTO95613 3336 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 STRNO43815 780 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 DGKIO75912 1065 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 STX3Q13277 289 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 FAM91A1Q658Y4 838 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 TRIM68Q6AZZ1 485 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 ALKAL1Q6UXT8 129 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 ZNF467Q7Z7K2 595 aaPredicted RBP18.89■□□□□ 0.61
SYNE4-204ENST00000465425 TEX9Q8N6V9 391 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 PDCD7Q8N8D1 485 aaKnown RBP18.89■□□□□ 0.61
SYNE4-204ENST00000465425 ATP2A3Q93084 1043 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 OLFM3Q96PB7 478 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 MMADHCQ9H3L0 296 aaPredicted RBP18.89■□□□□ 0.61
SYNE4-204ENST00000465425 CDHR5Q9HBB8 845 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 RCOR3Q9P2K3 495 aaPredicted RBP18.89■□□□□ 0.61
SYNE4-204ENST00000465425 STOML1Q9UBI4 398 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 LRRC42Q9Y546 428 aa18.89■□□□□ 0.61
SYNE4-204ENST00000465425 XPOTO43592 962 aaKnown RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 GPR32O75388 356 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 RARBP10826 455 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 PNPLA4P41247 253 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 RPL34P49207 117 aaKnown RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 AQP5P55064 265 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 CRADDP78560 199 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SLC25A52Q3SY17 297 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 DCAF6Q58WW2 860 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 BSPRYQ5W0U4 402 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 KYAT3Q6YP21 454 aaKnown RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 TIFABQ6ZNK6 161 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 DEFB106AQ8N104 65 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 TNIP3Q96KP6 325 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 RILPQ96NA2 401 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 FZD10Q9ULW2 581 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 USP3Q9Y6I4 520 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SYNJ2BP-COX16A0A087WUM0 186 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 MFSD11O43934 449 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 ENO1P06733 434 aaKnown RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SESN2P58004 480 aaPredicted RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SESN3P58005 492 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 IRX4P78413 519 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 KPNB1Q14974 876 aaKnown RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 PCBP1Q15365 356 aaKnown RBP eCLIP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 TSNAXIP1Q2TAA8 658 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 LRRC8BQ6P9F7 803 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 CCNYQ8ND76 341 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 STMN2Q93045 179 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SLC10A4Q96EP9 437 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 ZNF395Q9H8N7 513 aaPredicted RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 ARHGEF4Q9NR80 690 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 THAP1Q9NVV9 213 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 KLK14Q9P0G3 267 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 COX16Q9P0S2 106 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SEPT10Q9P0V9 454 aa18.88■□□□□ 0.61
SYNE4-204ENST00000465425 PIN4Q9Y237 131 aaKnown RBP18.88■□□□□ 0.61
SYNE4-204ENST00000465425 SMIM28A0A1B0GU29 152 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 H3BRJ5 948 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 PIRO00625 290 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 OPHN1O60890 802 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 HUS1O60921 280 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 ALDH1A2O94788 518 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 TAF6P49848 677 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 ADIGQ0VDE8 80 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 ZNF618Q5T7W0 954 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 STEAP4Q687X5 459 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 ZCCHC23Q6ZST2 131 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 MARK2Q7KZI7 788 aaKnown RBP18.87■□□□□ 0.61
SYNE4-204ENST00000465425 CCNJLQ8IV13 435 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 UNC5BQ8IZJ1 945 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 NME8Q8N427 588 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms