RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 PRRT4C9JH25 899 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 MSI1O43347 362 aaKnown RBP16.92■□□□□ 0.3
SSNA1-204ENST00000464553 ADAM23O75077 832 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 RHOBTB1O94844 696 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 IGLV3-25P01717 112 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 SDHBP21912 280 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 SLC6A3Q01959 620 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 ENPP2Q13822 863 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 KLHL40Q2TBA0 621 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 PIK3R6Q5UE93 754 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 SYPL2Q5VXT5 272 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 TMEM92Q6UXU6 159 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 PRR23BQ6ZRT6 265 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 ANKS1BQ7Z6G8 1248 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 SFTPA1Q8IWL2 248 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 OLIG1Q8TAK6 271 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 WFIKKN2Q8TEU8 576 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
SSNA1-204ENST00000464553 BTN2A3PQ96KV6 586 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 FCRL2Q96LA5 508 aaPredicted RBP16.92■□□□□ 0.3
SSNA1-204ENST00000464553 GABRG3Q99928 467 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 PCDHGA5Q9Y5G8 931 aa16.92■□□□□ 0.3
SSNA1-204ENST00000464553 TRIM24O15164 1050 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 CAVIN2O95810 425 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 TRUB2O95900 331 aaKnown RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 APOEP02649 317 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 NOS2P35228 1153 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 STAT1P42224 750 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 PXNP49023 591 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 JAM2P57087 298 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 POLR2FP61218 127 aaKnown RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 UBXN1Q04323 297 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ELF2Q15723 593 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 SPDYCQ5MJ68 293 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ACBD5Q5T8D3 534 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ARCQ7LC44 396 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 KIAA0907Q7Z7F0 614 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ERICH1Q86X53 443 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 CHPFQ8IZ52 775 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ATP6V0D2Q8N8Y2 350 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 C18orf8Q96DM3 657 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 SPAG5Q96R06 1193 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 SYNCQ9H7C4 482 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 ELOVL2Q9NXB9 296 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 THAP10Q9P2Z0 257 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 HCN2Q9UL51 889 aa16.91■□□□□ 0.3
SSNA1-204ENST00000464553 PTPRZ1P23471 2315 aaPredicted RBP16.91■□□□□ 0.3
SSNA1-204ENST00000464553 RIF1Q5UIP0 2472 aaKnown RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 TYW5A2RUC4 315 aaKnown RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 PRR5-ARHGAP8B1AHC4 643 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 CCDC172P0C7W6 258 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 SOX5P35711 763 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 ARHGAP8P85298 464 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 CDR2Q01850 454 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 ANO6Q4KMQ2 910 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 FAM133BQ5BKY9 247 aaKnown RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 OR6B2Q6IFH4 312 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 ANO7Q6IWH7 933 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 CAVIN1Q6NZI2 390 aaKnown RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 OLFML1Q6UWY5 402 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 TRIM72Q6ZMU5 477 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 PASD1Q8IV76 773 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 FAM160A2Q8N612 972 aaPredicted RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 HJURPQ8NCD3 748 aaPredicted RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 BHMTQ93088 406 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 HSD3B7Q9H2F3 369 aa16.9■□□□□ 0.3
SSNA1-204ENST00000464553 FAM207AQ9NSI2 230 aaPredicted RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 POLR3BQ9NW08 1133 aaPredicted RBP16.9■□□□□ 0.3
SSNA1-204ENST00000464553 MYOFQ9NZM1 2061 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 A0A1W2PQF6 199 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 KCNU1A8MYU2 1149 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 ZNF217O75362 1048 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 F9P00740 461 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.29
SSNA1-204ENST00000464553 HOXB2P14652 356 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 CCR1P32246 355 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 MATKP42679 507 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 ZNF165P49910 485 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 LMNB2Q03252 620 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 SYCP1Q15431 976 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 CSRP2Q16527 193 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 PLK5Q496M5 336 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 PTPN20Q4JDL3 420 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 EGFLAMQ63HQ2 1017 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.29
SSNA1-204ENST00000464553 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
SSNA1-204ENST00000464553 TAC4Q86UU9 113 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 CCDC117Q8IWD4 279 aaPredicted RBP16.89■□□□□ 0.29
SSNA1-204ENST00000464553 DEFB106AQ8N104 65 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 AOPEPQ8N6M6 819 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 MDGA1Q8NFP4 955 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 FIBINQ8TAL6 211 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 EPS8L1Q8TE68 723 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms