RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 ACSL4O60488 711 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CYBBP04839 570 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ABCB4P21439 1286 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GPD1P21695 349 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 RDXP35241 583 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 SOX9P48436 509 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 MAMLD1Q13495 774 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ANO4Q32M45 955 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ZC3H12AQ5D1E8 599 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TMEM31Q5JXX7 168 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ACBD5Q5T8D3 534 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 OTUD1Q5VV17 481 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TRNP1Q6NT89 227 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 STRADAQ7RTN6 431 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 BNIPLQ7Z465 357 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FBXL6Q8N531 539 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ATP6V0D2Q8N8Y2 350 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FLCNQ8NFG4 579 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 JOSD2Q8TAC2 188 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 RXFP2Q8WXD0 754 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FAM3CQ92520 227 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 RNF34Q969K3 372 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 BTN2A3PQ96KV6 586 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CFAP57Q96MR6 1250 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TBCBQ99426 244 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CHP1Q99653 195 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 LTB4R2Q9NPC1 389 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 C11orf16Q9NQ32 467 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 NENFQ9UMX5 172 aa12.11□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TYW5A2RUC4 315 aaKnown RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 SHISA7A6NL88 538 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 KCNU1A8MYU2 1149 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 STK25O00506 426 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TRDMT1O14717 391 aaKnown RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 NCAM2O15394 837 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ENDOD1O94919 500 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GJB6O95452 261 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 MOCS2O96007 188 aaPredicted RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 PENKP01210 267 aaPredicted RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 AOC1P19801 751 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CXCR3P49682 368 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CLCN5P51795 746 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ZNF143P52747 638 aaPredicted RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 UBXN2BQ14CS0 331 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CCDC14Q49A88 953 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 MPPE1Q53F39 396 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TXNDC11Q6PKC3 985 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TPGS1Q6ZTW0 290 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TMEM25Q86YD3 366 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 PJA1Q8NG27 643 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CD101Q93033 1021 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CHFRQ96EP1 664 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 P2RY13Q9BPV8 354 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 BBS2Q9BXC9 721 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GRPEL1Q9HAV7 217 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CALCOCO1Q9P1Z2 691 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 COL4A3Q01955 1670 aa12.1□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FAM86C2PA6NEL3 165 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TMEM191CA6NGB0 347 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 NEDD8-MDP1E9PL57 170 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GFRA2O00451 464 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CACNG3O60359 315 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TYRP14679 529 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TFE3P19532 575 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 DRD1P21728 446 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CD72P21854 359 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FECHP22830 423 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TARSP26639 723 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 MAGEA9P43362 315 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 VCPP55072 806 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 RPL7AP62424 266 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ATP11AP98196 1134 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 LRRC32Q14392 662 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 PON2Q15165 354 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 CDO1Q16878 200 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FAM133BQ5BKY9 247 aaKnown RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TMEM196Q5HYL7 178 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 C10orf76Q5T2E6 689 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 MPP7Q5T2T1 576 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 FYB2Q5VWT5 728 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 ASTLQ6HA08 431 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
TRAF3IP1-204ENST00000462122 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms