RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 HYIQ5T013 277 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 FAM90A2PQ658T7 463 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 FAM180BQ6P0A1 224 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 Q6ZWC4 215 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 ZNF551Q7Z340 670 aaPredicted RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 WDR53Q7Z5U6 358 aaPredicted RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 RP9Q8TA86 221 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 UCMAQ8WVF2 138 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 NPIPB3Q92617 1050 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 FUBP1Q96AE4 644 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 LENG9Q96B70 501 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 RRP36Q96EU6 259 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 WDYHV1Q96HA8 205 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 HS6ST2Q96MM7 605 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 REEP2Q9BRK0 252 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 RMI1Q9H9A7 625 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 PLEKHA2Q9HB19 425 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 CYP4F11Q9HBI6 524 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 TFCP2L1Q9NZI6 479 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 DKK2Q9UBU2 259 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 SWAP70Q9UH65 585 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 ASAP1Q9ULH1 1129 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 CCDC187A0A096LP49 1063 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 LOC105369274A0A096LPK9 316 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 LOC102723532A0A0G2JNH3 316 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 VWA3AA6NCI4 1184 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 MBD3L5A6NJ08 208 aaPredicted RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 C3orf70A6NLC5 250 aaPredicted RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 VWC2LB2RUY7 222 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 ZNF213O14771 459 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 NKX2-8O15522 239 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 HKR1P10072 659 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 EGR2P11161 476 aaPredicted RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 MYCLP12524 364 aaPredicted RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 PEPDP12955 493 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 TNNT1P13805 278 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 MATN1P21941 496 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 CTGFP29279 349 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 MCM5P33992 734 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 AVPR1BP47901 424 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 CCR5P51681 352 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 EEFSECP57772 596 aaKnown RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 RPL15P61313 204 aaKnown RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 MRPS35P82673 323 aaKnown RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 TLE3Q04726 772 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.53□□□□□ -1.84
VCL-203ENST00000461383 GPR68Q15743 365 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 FAM187BQ17R55 369 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 LRRC24Q50LG9 513 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 RUNDC3AQ59EK9 446 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 ACSM6Q6P461 480 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 ANKRD16Q6P6B7 361 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 MTHFD1LQ6UB35 978 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 CLEC4GQ6UXB4 293 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 DSTYKQ6XUX3 929 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 Q6ZNX1 250 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 PCGF5Q86SE9 256 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 OR4N4Q8N0Y3 316 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 TSPYL6Q8N831 410 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 LINS1Q8NG48 757 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 OR52L2PQ8NGH6 319 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 ACTRT2Q8TDY3 377 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 RFKQ969G6 155 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 KTI12Q96EK9 354 aaPredicted RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 ABHD16BQ9H3Z7 469 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 ACAD9Q9H845 621 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 SAP30LQ9HAJ7 183 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 PDE11AQ9HCR9 933 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 PREBQ9HCU5 417 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 TMEM160Q9NX00 188 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 FBXO2Q9UK22 296 aaPredicted RBP3.53□□□□□ -1.84
VCL-203ENST00000461383 TBX20Q9UMR3 447 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 GABRQQ9UN88 632 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 TSC22D4Q9Y3Q8 395 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 AFG3L2Q9Y4W6 797 aa3.53□□□□□ -1.84
VCL-203ENST00000461383 ITIH6Q6UXX5 1313 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 CCDC151A5D8V7 595 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 FAM90A20PA6NIJ5 464 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 TTC34A8MYJ7 566 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 M0QZQ0 153 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PLSCR1O15162 318 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 SUV39H1O43463 412 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 GUCY1B2O75343 617 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 HEXIM1O94992 359 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 PDE8BO95263 885 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 TBX18O95935 607 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 HSP90AA1P07900 732 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 WEE2P0C1S8 567 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 FAM163BP0C2L3 166 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PRKCHP24723 683 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 SLC8A1P32418 973 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PNPLA4P41247 253 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 PAFAH1B1P43034 410 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 DIO1P49895 249 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 JAK3P52333 1124 aa3.52□□□□□ -1.85
VCL-203ENST00000461383 COPB1P53618 953 aaKnown RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 FAM3BP58499 235 aaPredicted RBP3.52□□□□□ -1.85
VCL-203ENST00000461383 TAS2R50P59544 299 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms