RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TOGARAM2Q6ZUX3 1019 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BHLHA9Q7RTU4 235 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 KBTBD6Q86V97 674 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CCDC33Q8N5R6 958 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NAT16Q8N8M0 369 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EDEM1Q92611 657 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZC3H10Q96K80 434 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CPXM1Q96SM3 734 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ARRDC1-AS1Q9H2J1 176 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 POPDC2Q9HBU9 364 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PARD6AQ9NPB6 346 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NOCTQ9UK39 431 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ATG2BQ96BY7 2078 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 A0A1W2PQJ5 194 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MDM4O15151 490 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EPN2O95208 641 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TGM1P22735 817 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SLC6A3Q01959 620 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ASIC2Q16515 512 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CRY1Q16526 586 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GAB4Q2WGN9 574 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 AASDHQ4L235 1098 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MSANTD2Q6P1R3 559 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TXNDC5Q8NBS9 432 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CLEC4CQ8WTT0 213 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SLC20A1Q8WUM9 679 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BAP1Q92560 729 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EZH1Q92800 747 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SPACA7Q96KW9 195 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 AGPAT1Q99943 283 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BBS2Q9BXC9 721 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 XPO4Q9C0E2 1151 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SEPT11Q9NVA2 429 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ASNSD1Q9NWL6 643 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 AIPL1Q9NZN9 384 aa13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BCCIPQ9P287 314 aaKnown RBP eCLIP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 HBS1LQ9Y450 684 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP3-207ENST00000461009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NEDD8-MDP1E9PL57 170 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 HSF2BPO75031 334 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TULP3O75386 442 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 STC2O76061 302 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 HMBSP08397 361 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TPM1P09493 284 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CHKAP35790 457 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PBX1P40424 430 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GABRB2P47870 512 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 HARS2P49590 506 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ATXN1P54253 815 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 FMO1Q01740 532 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 E2F5Q15329 346 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PLK5Q496M5 336 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NAA35Q5VZE5 725 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GRAMD4Q6IC98 578 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ANO7Q6IWH7 933 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PPP1R2P3Q6NXS1 205 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 IRF2BP2Q7Z5L9 587 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 UNC45BQ8IWX7 931 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PGBD3Q8N328 593 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DNAJC17Q9NVM6 304 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SFMBT1Q9UHJ3 866 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 LUC7L2Q9Y383 392 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZNF292O60281 2723 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MYOFQ9NZM1 2061 aa13.79□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MAP3K13O43283 966 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ERBB2P04626 1255 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CYP1A1P04798 512 aaPredicted RBP13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CYBBP04839 570 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZNF806P0C7X5 589 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TYRP14679 529 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CHRNB2P17787 502 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SCNN1AP37088 669 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NSFP46459 744 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NOMO3P69849 1222 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZBED6P86452 979 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CDK17Q00537 523 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 KLHL30Q0D2K2 578 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PTPN20Q4JDL3 420 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 IL31Q6EBC2 164 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 FAM183BPQ6ZVS7 135 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ETFBKMTQ8IXQ9 262 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZNF513Q8N8E2 541 aaPredicted RBP13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 IL17RCQ8NAC3 791 aa13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SYN2Q92777 582 aaPredicted RBP13.78□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SERPINB11Q96P15 392 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms