RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CXorf51AA0A1B0GTR3 108 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ESYT3A0FGR9 886 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 MTMR11A4FU01 709 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 GOLGA6CA6NDK9 693 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DCLK1O15075 740 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 HCRTO43612 131 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 GRAP2O75791 330 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 FGF19O95750 216 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ITGB1P05556 798 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 FAM153BP0C7A2 387 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 GOLGA6DP0CG33 693 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 CSH1P0DML2 217 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 CSH2P0DML3 217 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 RAG1P15918 1043 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PHBP35232 272 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNJ1P48048 391 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 HTRA4P83105 476 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 UBE3AQ05086 875 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PRKD1Q15139 912 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TRIP4Q15650 581 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PSMD5Q16401 504 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 CDO1Q16878 200 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 SMTNL2Q2TAL5 461 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 FAM153CQ494X1 144 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ZC3H12AQ5D1E8 599 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DNAJC21Q5F1R6 531 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNT1Q5JUK3 1230 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNT2Q6UVM3 1135 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 UBE2Q1Q7Z7E8 422 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 UNC45BQ8IWX7 931 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PDIK1LQ8N165 341 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ATP6V0D2Q8N8Y2 350 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 STKLD1Q8NE28 680 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ZNF461Q8TAF7 563 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DQX1Q8TE96 717 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 CLEC4CQ8WTT0 213 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ATG4AQ8WYN0 398 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 HDAC11Q96DB2 347 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TMEM169Q96HH4 297 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNK16Q96T55 309 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DDX50Q9BQ39 737 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ADAM7Q9H2U9 754 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 CNOT10Q9H9A5 744 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 USP29Q9HBJ7 922 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 RXFP1Q9HBX9 757 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TMBIM4Q9HC24 238 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ARHGEF4Q9NR80 690 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TMLHEQ9NVH6 421 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 GOLGA6AQ9NYA3 693 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 FAM153AQ9UHL3 310 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 NAALADL1Q9UQQ1 740 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ATP11BQ9Y2G3 1177 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PRG3Q9Y2Y8 225 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ACTL7BQ9Y614 415 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ZSCAN5CA6NGD5 496 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 KCNU1A8MYU2 1149 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 H7C0C1 242 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 AGPSO00116 658 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 RIPK2O43353 540 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 B4GALT3O60512 393 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 SYF2O95926 243 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 AGTP01019 485 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 IGLV3-27P01718 113 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 APOEP02649 317 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 POU2F2P09086 479 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 CPB1P15086 417 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 OAS2P29728 719 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 GGCXP38435 758 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 ATP5OP48047 213 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 IFNAR2P48551 515 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 NDUFV1P49821 464 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 TPI1P60174 286 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 SKOR1P84550 965 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 TNK2Q07912 1038 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 GPS1Q13098 491 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 FRG1Q14331 258 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 MANEALQ5VSG8 457 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 NUGGCQ68CJ6 796 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 HEATR6Q6AI08 1181 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 TIGD7Q6NT04 549 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 ITIH5Q86UX2 942 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 KLHDC8BQ8IXV7 354 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 NAT8LQ8N9F0 302 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 FBXO22Q8NEZ5 403 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 SLC39A13Q96H72 371 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 BTN2A3PQ96KV6 586 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 ATP6V1G3Q96LB4 118 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 ZIM3Q96PE6 472 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 GPR62Q9BZJ7 368 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 SENP1Q9P0U3 644 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 PRKAG2Q9UGJ0 569 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 MTCL1Q9Y4B5 1905 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 A0A087WUV0 522 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-210ENST00000454859 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms