RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 F2P00734 622 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 RARBP10826 455 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 VAV1P15498 845 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 SERPINB3P29508 390 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 NOS2P35228 1153 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 TAF6P49848 677 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 RAP1GDS1P52306 607 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 GJA9P57773 515 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 BST1Q10588 318 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 PPP6R3Q5H9R7 873 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 OTUD1Q5VV17 481 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 C7orf31Q8N865 590 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 MAML3Q96JK9 1138 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 MS4A4AQ96JQ5 239 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 PPP1R16BQ96T49 567 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 EIF2AQ9BY44 585 aaKnown RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 WWP1Q9H0M0 922 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 DPEP3Q9H4B8 488 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 DENND2DQ9H6A0 471 aaPredicted RBP12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 GJD2Q9UKL4 321 aa12.92□□□□□ -0.34
ECHDC1-209ENST00000454591 FNDC1Q4ZHG4 1894 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 SDR42E2A6NKP2 422 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 FCHO1O14526 889 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 GLRA3O75311 464 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 MYL2P10916 166 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 PGAM1P18669 254 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 HCAR3P49019 387 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 ZNF135P52742 658 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 SCAPQ12770 1279 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 PDK1Q15118 436 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 KIZQ2M2Z5 673 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 HSF5Q4G112 596 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 INTS6LQ5JSJ4 861 aaKnown RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 FAXCQ5TGI0 409 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 CCDC185Q8N715 623 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 CLEC4CQ8WTT0 213 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 NTAN1Q96AB6 310 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 FERMT1Q9BQL6 677 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 DUSP16Q9BY84 665 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 SNX25Q9H3E2 840 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 FAM96AQ9H5X1 160 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 THAP1Q9NVV9 213 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 NKX1-2Q9UD57 310 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 ADAM28Q9UKQ2 775 aa12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
ECHDC1-209ENST00000454591 HAS3O00219 553 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 GSRP00390 522 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 AMPD1P23109 780 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 MAGEA12P43365 314 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 MTM1Q13496 603 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 DPYSQ14117 519 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 UBXN11Q5T124 520 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 TRMT10BQ6PF06 316 aaKnown RBP12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 NUDCD3Q8IVD9 361 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 MPP5Q8N3R9 675 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 TEX9Q8N6V9 391 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 ARNTL2Q8WYA1 636 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 CDKL2Q92772 493 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 PGAP3Q96FM1 320 aaPredicted RBP12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 C1orf21Q9H246 121 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 TAS2R1Q9NYW7 299 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 RNF181Q9P0P0 153 aa12.9□□□□□ -0.34
ECHDC1-209ENST00000454591 F8W8V4 182 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 PDHXO00330 501 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 GABRDO14764 452 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 SPTLC1O15269 473 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 UGT1A9O60656 530 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 FBXO21O94952 628 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 ESRRAP11474 423 aaPredicted RBP12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 NEFHP12036 1026 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 MYL4P12829 197 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 CCDC130P13994 396 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 GOT1P17174 413 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 GTF2A2P52657 109 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 ZBTB16Q05516 673 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
ECHDC1-209ENST00000454591 SPANXN3Q5MJ09 141 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms