RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ARTNQ5T4W7 220 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 PIK3R6Q5UE93 754 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 OTUD1Q5VV17 481 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 GRAMD4Q6IC98 578 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 RASSF3Q86WH2 238 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 ZNF677Q86XU0 584 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 UNC45BQ8IWX7 931 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 DEFB106AQ8N104 65 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 TMEM35BQ8NCS4 154 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 ANKRD20A12PQ8NF67 263 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 BAP1Q92560 729 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 FAM149B1Q96BN6 582 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 XPO6Q96QU8 1125 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 SYT11Q9BT88 431 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 SLC2A11Q9BYW1 496 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.28
SCAMP4-205ENST00000452128 KIAA1549LQ6ZVL6 1849 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 TBC1D3BA6NDS4 549 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 ACSL4O60488 711 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 HSF2BPO75031 334 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 TRUB2O95900 331 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 STAT1P42224 750 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 SGSHP51688 502 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 SEC13P55735 322 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 ENPP2Q13822 863 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 CRY1Q16526 586 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 PREPLQ4J6C6 727 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 MPP7Q5T2T1 576 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 NUGGCQ68CJ6 796 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 TMEM215Q68D42 235 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 TRNP1Q6NT89 227 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 BNIPLQ7Z465 357 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 IRF2BP2Q7Z5L9 587 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 XYLT1Q86Y38 959 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 ZDHHC17Q8IUH5 632 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 CCDC33Q8N5R6 958 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 ALLCQ8N6M5 410 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 ADAM32Q8TC27 787 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 ACDQ96AP0 544 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 SERPINB11Q96P15 392 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 TRIM62Q9BVG3 475 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 XPO7Q9UIA9 1087 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 SLC8A2Q9UPR5 921 aa16.76■□□□□ 0.27
SCAMP4-205ENST00000452128 A0A1W2PQF6 199 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 KLF8O95600 359 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 UNGP13051 313 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 PTMSP20962 102 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 CNR2P34972 360 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 TIE1P35590 1138 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 PXNP49023 591 aaPredicted RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 DGKGP49619 791 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 ZNF445P59923 1031 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 SRSF5Q13243 272 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 GEN1Q17RS7 908 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 MPPE1Q53F39 396 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 ZC3H12AQ5D1E8 599 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 OR6B2Q6IFH4 312 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 RFWD3Q6PCD5 774 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 ARCQ7LC44 396 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 TXNDC5Q8NBS9 432 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 NEK11Q8NG66 645 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 GOLGA1Q92805 767 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 BHMTQ93088 406 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 C18orf8Q96DM3 657 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 TMA16Q96EY4 203 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 NOX5Q96PH1 765 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 ACOX2Q99424 681 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 NPY6RQ99463 290 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 PRMT1Q99873 361 aaKnown RBP16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 ZDHHC4Q9NPG8 344 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 TMEM59LQ9UK28 342 aa16.75■□□□□ 0.27
SCAMP4-205ENST00000452128 A0A1W2PQC6 194 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 I6L893 689 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 GRAP2O75791 330 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 TFE3P19532 575 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 TGM1P22735 817 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 MMP8P22894 467 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 PBX1P40424 430 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 DCAF6Q58WW2 860 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 C10orf76Q5T2E6 689 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 EGFLAMQ63HQ2 1017 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 HEATR6Q6AI08 1181 aaKnown RBP16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 LUZP1Q86V48 1076 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 PGAP3Q96FM1 320 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 PRICKLE1Q96MT3 831 aaPredicted RBP16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 HHIPQ96QV1 700 aa16.74■□□□□ 0.27
SCAMP4-205ENST00000452128 TSPAN3O60637 253 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 DAB1O75553 588 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 APBB3O95704 486 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 C7P10643 843 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 HLA-FP30511 346 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 NOS2P35228 1153 aa16.73■□□□□ 0.27
SCAMP4-205ENST00000452128 MATKP42679 507 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms