RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ZNF839A8K0R7 811 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 ABLIM1O14639 778 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 TYROBPO43914 113 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 TSPAN3O60637 253 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 BPGMP07738 259 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 DLDP09622 509 aaKnown RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 CSH1P0DML2 217 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 CSH2P0DML3 217 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 GARTP22102 1010 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 OGDHQ02218 1023 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 DLG2Q15700 870 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 STXBP2Q15833 593 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 PITRM1Q5JRX3 1037 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 UNC5AQ6ZN44 842 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 NAT16Q8N8M0 369 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 CATSPER1Q8NEC5 780 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 TFAP2BQ92481 460 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 JADE3Q92613 823 aa12.74□□□□□ -0.37
UBE3B-204ENST00000449510 DRG1Q9Y295 367 aaKnown RBP12.74□□□□□ -0.37
UBE3B-204ENST00000449510 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 DFFAO00273 331 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SLC26A4O43511 780 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 IL10P22301 178 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 CYP2F1P24903 491 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 KLRC2P26717 231 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 IL1R2P27930 398 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PTGER2P43116 358 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 DAB2P98082 770 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 GOLGA7BQ2TAP0 167 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PPM1LQ5SGD2 360 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 TMEM63BQ5T3F8 832 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 IPMKQ8NFU5 416 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 HPDLQ96IR7 371 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 ELMO2Q96JJ3 720 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 CPXM1Q96SM3 734 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 TIPINQ9BVW5 301 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 FAM96AQ9H5X1 160 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 OCEL1Q9H607 264 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 COL20A1Q9P218 1284 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 EGFL7Q9UHF1 273 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PMPCBO75439 489 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 TRMUO75648 421 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SUPT7LO94864 414 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 LSM3P62310 102 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 MPP5Q8N3R9 675 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 FBXW8Q8N3Y1 598 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 FAM47BQ8NA70 645 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 TMA7Q9Y2S6 64 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PEX10O60683 326 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 CCNE2O96020 404 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 OCM2P0CE71 109 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 OCMP0CE72 109 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■■□□□ 13.7
UBE3B-204ENST00000449510 ZNF23P17027 643 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 GBE1Q04446 702 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PTPN11Q06124 597 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 OR52E8Q6IFG1 317 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 BBS12Q6ZW61 710 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PDZD4Q76G19 769 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PATL1Q86TB9 770 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 KIAA2013Q8IYS2 634 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 ENDOVQ8N8Q3 282 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 PBXIP1Q96AQ6 731 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 NRBF2Q96F24 287 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SARS2Q9NP81 518 aaKnown RBP12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 DCDC2Q9UHG0 476 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
UBE3B-204ENST00000449510 SMIM31A0A1B0GVY4 71 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 MAGP20916 626 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 JAG1P78504 1218 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 CCDC92Q53HC0 331 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 CCDC81Q6ZN84 652 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 DRAXINQ8NBI3 349 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 DENND1AQ8TEH3 1009 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 FSD1LQ9BXM9 530 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 NOL11Q9H8H0 719 aaKnown RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 TMX2Q9Y320 296 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 HEMK1Q9Y5R4 338 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 GAKO14976 1311 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 PTGES3LE9PB15 166 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 SMAPO00193 183 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 ABCE1P61221 599 aaKnown RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 DMPKQ09013 629 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 PRKD1Q15139 912 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-204ENST00000449510 C6orf10Q5SRN2 563 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 FRMD7Q6ZUT3 714 aa12.72□□□□□ -0.37
UBE3B-204ENST00000449510 TMCO5AQ8N6Q1 288 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms