RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 NPY6RQ99463 290 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 IRX2Q9BZI1 471 aaPredicted RBP14.65□□□□□ -0.06
SSBP3-208ENST00000444533 TBC1D17Q9HA65 648 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 HPS4Q9NQG7 708 aa14.65□□□□□ -0.06
SSBP3-208ENST00000444533 KRBA1A5PL33 1030 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 NEDD8-MDP1E9PL57 170 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 ACSL4O60488 711 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 RNF8O76064 485 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 IGLV3-27P01718 113 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 CYP17A1P05093 508 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 H2AFZP0C0S5 128 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 FLT3P36888 993 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 PTPN9P43378 593 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 ATP11AP98196 1134 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 GFPT1Q06210 699 aaPredicted RBP14.64□□□□□ -0.07
SSBP3-208ENST00000444533 LRRC32Q14392 662 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 CDO1Q16878 200 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 MPPE1Q53F39 396 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 H2AFVQ71UI9 128 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 TMTC1Q8IUR5 882 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 EMC1Q8N766 993 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 FCRL2Q96LA5 508 aaPredicted RBP14.64□□□□□ -0.07
SSBP3-208ENST00000444533 TBCBQ99426 244 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 LCMT1Q9UIC8 334 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 NDRG2Q9UN36 371 aaKnown RBP14.64□□□□□ -0.07
SSBP3-208ENST00000444533 SIT1Q9Y3P8 196 aa14.64□□□□□ -0.07
SSBP3-208ENST00000444533 C2CD4BA6NLJ0 364 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 KCNU1A8MYU2 1149 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 PRR33A8MZF0 331 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 F5H5T6 163 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 HOXC11O43248 304 aaPredicted RBP14.63□□□□□ -0.07
SSBP3-208ENST00000444533 GPR37L1O60883 481 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 IGLV3-25P01717 112 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 KLKB1P03952 638 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 GJA4P35212 333 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 RFC1P35251 1148 aaPredicted RBP14.63□□□□□ -0.07
SSBP3-208ENST00000444533 EIF2DP41214 584 aaKnown RBP14.63□□□□□ -0.07
SSBP3-208ENST00000444533 MRE11P49959 708 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 ZNF143P52747 638 aaPredicted RBP14.63□□□□□ -0.07
SSBP3-208ENST00000444533 MAMLD1Q13495 774 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 RABGAP1LQ5R372 815 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 PLEKHA7Q6IQ23 1121 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 RHBDF2Q6PJF5 856 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 STRADAQ7RTN6 431 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 BMP8AQ7Z5Y6 402 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 CHSY1Q86X52 802 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 TXLNBQ8N3L3 684 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 CD101Q93033 1021 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 NT5C3BQ969T7 300 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 TMA16Q96EY4 203 aaKnown RBP14.63□□□□□ -0.07
SSBP3-208ENST00000444533 SLC39A13Q96H72 371 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 CHP1Q99653 195 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 P2RY13Q9BPV8 354 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 CNPY3Q9BT09 278 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 OSBPL6Q9BZF3 934 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 DEC1Q9P2X7 70 aa14.63□□□□□ -0.07
SSBP3-208ENST00000444533 BDP1A6H8Y1 2624 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 FAM170BA6NMN3 283 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 ATMINO43313 823 aaPredicted RBP14.62□□□□□ -0.07
SSBP3-208ENST00000444533 GREM1O60565 184 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 APODP05090 189 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 TYRP14679 529 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 DRD1P21728 446 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 PSMA2P25787 234 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 MAGEA9P43362 315 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 SOX9P48436 509 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 CXCR3P49682 368 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 CLCN5P51795 746 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 PON2Q15165 354 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 E2F5Q15329 346 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 CCDC14Q49A88 953 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 DGKKQ5KSL6 1271 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 TTC39BQ5VTQ0 682 aaPredicted RBP14.62□□□□□ -0.07
SSBP3-208ENST00000444533 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
SSBP3-208ENST00000444533 LRRC31Q6UY01 552 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 TMEM25Q86YD3 366 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 FBXL6Q8N531 539 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 HJURPQ8NCD3 748 aaPredicted RBP14.62□□□□□ -0.07
SSBP3-208ENST00000444533 JOSD2Q8TAC2 188 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 FAM172AQ8WUF8 416 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 BHMTQ93088 406 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 WBP2Q969T9 261 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 PNKPQ96T60 521 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 BAG1Q99933 345 aaPredicted RBP14.62□□□□□ -0.07
SSBP3-208ENST00000444533 TKTL2Q9H0I9 626 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 THAP2Q9H0W7 228 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 LTB4R2Q9NPC1 389 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 PIGVQ9NUD9 493 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 MARK1Q9P0L2 795 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 CTTNBP2NLQ9P2B4 639 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 STOML2Q9UJZ1 356 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 TICRRQ7Z2Z1 1910 aa14.62□□□□□ -0.07
SSBP3-208ENST00000444533 FAM86C2PA6NEL3 165 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 MYO1FO00160 1098 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 TRDMT1O14717 391 aaKnown RBP14.61□□□□□ -0.07
SSBP3-208ENST00000444533 TSPAN3O60637 253 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 CD72P21854 359 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 GALCP54803 685 aa14.61□□□□□ -0.07
SSBP3-208ENST00000444533 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms