RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 ANKRD20A1Q5TYW2 823 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 TTC39BQ5VTQ0 682 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 TRPM8Q7Z2W7 1104 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 TCP10LQ8TDR4 215 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 TRIB2Q92519 343 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 MUC3BQ9H195 1237 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 ECT2Q9H8V3 914 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 ACTR5Q9H9F9 607 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 LRRC4CQ9HCJ2 640 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 NT5MQ9NPB1 228 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 ZC3H4Q9UPT8 1303 aaKnown RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 YJEFN3A6XGL0 299 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 E7ENQ6 273 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 SMAPO00193 183 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 HOXA11P31270 313 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 FDFT1P37268 417 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 RAB6CQ53S08 254 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 SLC45A4Q5BKX6 768 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 MAMDC4Q6UXC1 1216 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 RIBC1Q8N443 379 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 KAT2BQ92831 832 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 BCO2Q9BYV7 579 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 RAB6CQ9H0N0 254 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 PTPRHQ9HD43 1115 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 DDX20Q9UHI6 824 aaKnown RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 PHTF1Q9UMS5 762 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 KIAA0100Q14667 2235 aaKnown RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 MDM4O15151 490 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 SPAG6O75602 509 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 GLRBP48167 497 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 HARS2P49590 506 aaKnown RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 SOX4Q06945 474 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 ENPEPQ07075 957 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 TSTA3Q13630 321 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 SYPL2Q5VXT5 272 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 SLC26A11Q86WA9 606 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 AFAP1L2Q8N4X5 818 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 CSPG4P5Q96PW8 444 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 RAB3IPQ96QF0 476 aaPredicted RBP10.91□□□□□ -0.66
CALD1-210ENST00000443197 HERPUD2Q9BSE4 406 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 MANSC1Q9H8J5 431 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 ABCF3Q9NUQ8 709 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 KANSL3Q9P2N6 904 aa10.91□□□□□ -0.66
CALD1-210ENST00000443197 A0A1W2PPM1 405 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 DCTN3O75935 186 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 NUDT17P0C025 328 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 TWF1Q12792 350 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 CHI3L2Q15782 390 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 SNCBQ16143 134 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 HSP90AA5PQ58FG0 334 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 NAPEPLDQ6IQ20 393 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 ARID3BQ8IVW6 561 aaPredicted RBP10.9□□□□□ -0.66
CALD1-210ENST00000443197 BLOC1S5Q8TDH9 187 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 FNIP1Q8TF40 1166 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 FGD4Q96M96 766 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 GCNAQ96QF7 691 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 NFKBIZQ9BYH8 718 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 C12orf65Q9H3J6 166 aaKnown RBP10.9□□□□□ -0.66
CALD1-210ENST00000443197 GTSE1Q9NYZ3 720 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 IL1RAPL1Q9NZN1 696 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 MPP6Q9NZW5 540 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 SPTLC1O15269 473 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 CFLARO15519 480 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 RPSAP08865 295 aaKnown RBP10.9□□□□□ -0.66
CALD1-210ENST00000443197 ADRA1DP25100 572 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 GRK4P32298 578 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 TBX4P57082 545 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 ACTN3Q08043 901 aaPredicted RBP10.9□□□□□ -0.66
CALD1-210ENST00000443197 NSUN2Q08J23 767 aaKnown RBP eCLIP10.9□□□□□ -0.66
CALD1-210ENST00000443197 SLC12A1Q13621 1099 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 SLC25A52Q3SY17 297 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 ARHGAP24Q8N264 748 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 PPHLN1Q8NEY8 458 aaKnown RBP10.9□□□□□ -0.66
CALD1-210ENST00000443197 OR52K1Q8NGK4 314 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 SCAMP5Q8TAC9 235 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 GSDMBQ8TAX9 411 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 ZIC5Q96T25 663 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 TASP1Q9H6P5 420 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 IARS2Q9NSE4 1012 aaKnown RBP10.9□□□□□ -0.66
CALD1-210ENST00000443197 ZDHHC18Q9NUE0 388 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 TXLNGQ9NUQ3 528 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 FAM8A1Q9UBU6 413 aa10.9□□□□□ -0.66
CALD1-210ENST00000443197 TSPAN3O60637 253 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 HAUS5O94927 633 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 ZNF865P0CJ78 1059 aaPredicted RBP10.9□□□□□ -0.67
CALD1-210ENST00000443197 YWHAQP27348 245 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 RPA3P35244 121 aaPredicted RBP10.9□□□□□ -0.67
CALD1-210ENST00000443197 ALDH18A1P54886 795 aaKnown RBP10.9□□□□□ -0.67
CALD1-210ENST00000443197 SKOR1P84550 965 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 KDSRQ06136 332 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 DBF4BQ8NFT6 615 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 PCDH19Q8TAB3 1148 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 CPT1BQ92523 772 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 CD101Q93033 1021 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 ALKBH8Q96BT7 664 aaKnown RBP10.9□□□□□ -0.67
CALD1-210ENST00000443197 MCRS1Q96EZ8 462 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 FICDQ9BVA6 458 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 CXCL16Q9H2A7 254 aa10.9□□□□□ -0.67
CALD1-210ENST00000443197 AGO3Q9H9G7 860 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms