RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ST7Q9NRC1 585 aa19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 SAMSN1Q9NSI8 373 aaKnown RBP19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 CACNA2D2Q9NY47 1150 aa19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 BCCIPQ9P287 314 aaKnown RBP eCLIP19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 DNAJC12Q9UKB3 198 aa19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 CDV3Q9UKY7 258 aaKnown RBP19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 PCDHGC3Q9UN70 934 aa19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 NAALADL1Q9UQQ1 740 aa19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 LAMA1P25391 3075 aa19.71■□□□□ 0.75
HMGB3P22-201ENST00000442010 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 E5RJQ4 531 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 SLC30A4O14863 429 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 SART1O43290 800 aaKnown RBP19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 NCAM1P13591 858 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 KCNMA1Q12791 1236 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 HSP90AA4PQ58FG1 418 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 FAM133BQ5BKY9 247 aaKnown RBP19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 SYPL2Q5VXT5 272 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 NUGGCQ68CJ6 796 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 ANKS1BQ7Z6G8 1248 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 GOLGA1Q92805 767 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 SLC39A13Q96H72 371 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 FCRL2Q96LA5 508 aaPredicted RBP19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 SMOC1Q9H4F8 434 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 VPS45Q9NRW7 570 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 RXFP3Q9NSD7 469 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 TJP2Q9UDY2 1190 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 RAD54BQ9Y620 910 aa19.7■□□□□ 0.74
HMGB3P22-201ENST00000442010 FOXN3O00409 490 aaPredicted RBP19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 TSPAN3O60637 253 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 NDUFV2P19404 249 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 HLA-FP30511 346 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 SLC6A4P31645 630 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 CLCN1P35523 988 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 USP8P40818 1118 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 SGSHP51688 502 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 LIMK1P53667 647 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 TBX4P57082 545 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 CREB5Q02930 508 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 PDCLQ13371 301 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 NNTQ13423 1086 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 SDE2Q6IQ49 451 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 KIAA0907Q7Z7F0 614 aaPredicted RBP19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 UNC45BQ8IWX7 931 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 TMA16Q96EY4 203 aaKnown RBP19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 IRX2Q9BZI1 471 aaPredicted RBP19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 ELOVL2Q9NXB9 296 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 CALCOCO1Q9P1Z2 691 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 TLR6Q9Y2C9 796 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 STON1Q9Y6Q2 735 aa19.69■□□□□ 0.74
HMGB3P22-201ENST00000442010 GOLGA6L7A0A1B0GV03 622 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 KCNJ18B7U540 433 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 NPC1O15118 1278 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 ACSL4O60488 711 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 CAVIN2O95810 425 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 IGLV3-25P01717 112 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 PRKCSHP14314 528 aaPredicted RBP19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 IL12RB1P42701 662 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 EIF4EBP2Q13542 120 aaPredicted RBP19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 BYSLQ13895 437 aaKnown RBP19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 KCNJ12Q14500 433 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 EIF4HQ15056 248 aaKnown RBP19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 PIK3R6Q5UE93 754 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 NADSYN1Q6IA69 706 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 TAC4Q86UU9 113 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 FAM71AQ8IYT1 594 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 PGBD3Q8N328 593 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 ENOX1Q8TC92 643 aaKnown RBP19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 FAM149B1Q96BN6 582 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 SPACA7Q96KW9 195 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 SERPINB11Q96P15 392 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 CPXM1Q96SM3 734 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 LHX5Q9H2C1 402 aa19.68■□□□□ 0.74
HMGB3P22-201ENST00000442010 NCOR2Q9Y618 2525 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 MED19A0JLT2 244 aaPredicted RBP19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 PNMA6AP0CW24 399 aaPredicted RBP19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 TCP11X2Q5H9J9 407 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 SPDYCQ5MJ68 293 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 MPP7Q5T2T1 576 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 TCEAL6Q6IPX3 200 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 RFWD3Q6PCD5 774 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 SLC47A2Q86VL8 602 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 C12orf50Q8NA57 414 aaPredicted RBP19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 TCEAL3Q969E4 200 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 MRGPRX1Q96LB2 322 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 GBP4Q96PP9 640 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 NAA15Q9BXJ9 866 aaKnown RBP19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 POPDC2Q9HBU9 364 aa19.67■□□□□ 0.74
HMGB3P22-201ENST00000442010 ADAMTS9Q9P2N4 1935 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 ASCC3Q8N3C0 2202 aaKnown RBP19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 IGHV1OR15-9A0A0B4J2B8 117 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 DCDC2BA2VCK2 349 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 IRAK2O43187 625 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 TIMM44O43615 452 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 EEF1GP26641 437 aaKnown RBP19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 SLC11A2P49281 568 aa19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 YWHAZP63104 245 aaKnown RBP19.66■□□□□ 0.74
HMGB3P22-201ENST00000442010 PTK2Q05397 1052 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms